Gene EcHS_A0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0032 
SymbolrihC 
ID5594057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp30552 
End bp31466 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content56% 
IMG OID640919220 
Productribonucleoside hydrolase RihC 
Protein accessionYP_001456815 
Protein GI157159497 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAC CTATCTTCCT CGATACTGAC CCCGGCATTG ACGATGCCGT CGCCATTGCC 
GCCGCGATTT TTGCACCCGA ACTCGACCTG CAACTGATGA CCACCGTCGC GGGTAATGTC
TCGGTTGAGA AAACTACCCG CAATGCCCTG CAACTGCTGC ATTTCTGGAA TGCGGAGATT
CCGCTCGCCC AAGGGGCCGC TGTGCCGCTG GTACGCGCAC CGCGTGATGC GGCATCTGTG
CACGGCGAAT CGGGAATGGC TGGCTACGAC TTTGTTGAGC ACAACCGAAA GCCGCTCGGG
ATACCGGCGT TTCTGGCGAT TCGGGATGCC CTGATGCGTG CACCAGAGCC TGTTACCCTG
GTGGCCATTG GCCCGTTAAC CAATATTGCG CTGTTACTTT CACAATGCCC GGAATGCAAG
CCGTATATTC GCCGTCTGGT GATCATGGGT GGTTCTGCCG GACGCGGCAA CTGTACGCCA
AACGCCGAGT TTAATATCGC TGCCGATCCA GAAGCGGCTG CCTGTGTCTT CCGTAGCGGA
ATCGAAATCG TCATGTGCGG TCTGGATGTC ACCAATCAGG CAATATTAAC CCCTGACTAT
CTCGCTACTT TGCCGGAGTT GAATCGCACC GGAAAAATGC TTCATGCACT GTTTAGCCAC
TACCGTAGCG GCAGTATGCA AAGCGGTCTG CGAATGCACG ATCTCTGCGC CATCGCCTGG
CTGGTGCGCC CGGACTTATT CACCCTCAAG CCGTGTTTTG TCGCGGTAGA AACTCAAGGC
GAATTTACCT CAGGCACGAC GGTGGTTGAT ATCGACGGTT GCCTGGGCAA ACCAGCCAAT
GTAAAGGTGG CATTGGATCT GGATGTGAAA GGCTTCCAGC AGTGGGTGGC TGAGGTGCTG
GCTCTGGCGT CGTAA
 
Protein sequence
MRLPIFLDTD PGIDDAVAIA AAIFAPELDL QLMTTVAGNV SVEKTTRNAL QLLHFWNAEI 
PLAQGAAVPL VRAPRDAASV HGESGMAGYD FVEHNRKPLG IPAFLAIRDA LMRAPEPVTL
VAIGPLTNIA LLLSQCPECK PYIRRLVIMG GSAGRGNCTP NAEFNIAADP EAAACVFRSG
IEIVMCGLDV TNQAILTPDY LATLPELNRT GKMLHALFSH YRSGSMQSGL RMHDLCAIAW
LVRPDLFTLK PCFVAVETQG EFTSGTTVVD IDGCLGKPAN VKVALDLDVK GFQQWVAEVL
ALAS