Gene EcHS_A0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0012 
Symbol 
ID5595006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp10642 
End bp11355 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content51% 
IMG OID640919201 
Producthypothetical protein 
Protein accessionYP_001456796 
Protein GI157159478 
COG category[S] Function unknown 
COG ID[COG4735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.242726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTA ATTACCTGAA TGATTCAGAT CTGGATTTTC TCCAGCATTG CAGTGAGGAA 
CAGTTGGCAA ATTTCGCCCG ATTGCTCACC CATAATGAAA AAGGCAAAAC TCGCCTCTCC
AGCGTACTGA TGCGCAACGA ACTGTTTAAA TCGATGGAAG GGCATCCCGA GCAACATCGC
CGCAACTGGC AGCTGATTGC TGGAGAATTA CAGCATTTTG GTGGCGATAG TATCGCCAAC
AAACTGCGCG GACACGGTAA ATTGTATCGG GCCATTTTGC TCGATGTTTC AAAACGATTG
AAGCTGAAAG CCGACAAAGA GATGTCTACG TTTGAGATTG AGCAACAGTT ACTGGAACAA
TTTCTGCGTA ACACCTGGAA GAATATGGAC GAGGAACATA AACAGGAGTT TCTGCACGCG
GTCGATGCGA GGGTGAATGA GCTGGAAGAG CTGCTGCCGC TGCTGATGAA AGACAAATTA
TTGGCAAAAG GCGTGTCGCA TTTGCTTTCC AGCCAACTGA CCCGCATTTT ACGCACCCAC
GCAGCAATGA GCGTACTTGG GCATGGTTTG CTGCGCGGCG CGGGGCTGGG AGGCCCTGTA
GGTGCGGCAC TAAATGGGGT TAAAGCGGTC AGCGGCAGCG CCTATCGCGT GACGATTCCA
GCCGTACTGC AAATCGCCTG CCTGCGCCGG ATGGTTAGCG CCACTCAGGT CTGA
 
Protein sequence
MNVNYLNDSD LDFLQHCSEE QLANFARLLT HNEKGKTRLS SVLMRNELFK SMEGHPEQHR 
RNWQLIAGEL QHFGGDSIAN KLRGHGKLYR AILLDVSKRL KLKADKEMST FEIEQQLLEQ
FLRNTWKNMD EEHKQEFLHA VDARVNELEE LLPLLMKDKL LAKGVSHLLS SQLTRILRTH
AAMSVLGHGL LRGAGLGGPV GAALNGVKAV SGSAYRVTIP AVLQIACLRR MVSATQV