Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0012 |
Symbol | |
ID | 5595006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 10642 |
End bp | 11355 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640919201 |
Product | hypothetical protein |
Protein accession | YP_001456796 |
Protein GI | 157159478 |
COG category | [S] Function unknown |
COG ID | [COG4735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.242726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGTTA ATTACCTGAA TGATTCAGAT CTGGATTTTC TCCAGCATTG CAGTGAGGAA CAGTTGGCAA ATTTCGCCCG ATTGCTCACC CATAATGAAA AAGGCAAAAC TCGCCTCTCC AGCGTACTGA TGCGCAACGA ACTGTTTAAA TCGATGGAAG GGCATCCCGA GCAACATCGC CGCAACTGGC AGCTGATTGC TGGAGAATTA CAGCATTTTG GTGGCGATAG TATCGCCAAC AAACTGCGCG GACACGGTAA ATTGTATCGG GCCATTTTGC TCGATGTTTC AAAACGATTG AAGCTGAAAG CCGACAAAGA GATGTCTACG TTTGAGATTG AGCAACAGTT ACTGGAACAA TTTCTGCGTA ACACCTGGAA GAATATGGAC GAGGAACATA AACAGGAGTT TCTGCACGCG GTCGATGCGA GGGTGAATGA GCTGGAAGAG CTGCTGCCGC TGCTGATGAA AGACAAATTA TTGGCAAAAG GCGTGTCGCA TTTGCTTTCC AGCCAACTGA CCCGCATTTT ACGCACCCAC GCAGCAATGA GCGTACTTGG GCATGGTTTG CTGCGCGGCG CGGGGCTGGG AGGCCCTGTA GGTGCGGCAC TAAATGGGGT TAAAGCGGTC AGCGGCAGCG CCTATCGCGT GACGATTCCA GCCGTACTGC AAATCGCCTG CCTGCGCCGG ATGGTTAGCG CCACTCAGGT CTGA
|
Protein sequence | MNVNYLNDSD LDFLQHCSEE QLANFARLLT HNEKGKTRLS SVLMRNELFK SMEGHPEQHR RNWQLIAGEL QHFGGDSIAN KLRGHGKLYR AILLDVSKRL KLKADKEMST FEIEQQLLEQ FLRNTWKNMD EEHKQEFLHA VDARVNELEE LLPLLMKDKL LAKGVSHLLS SQLTRILRTH AAMSVLGHGL LRGAGLGGPV GAALNGVKAV SGSAYRVTIP AVLQIACLRR MVSATQV
|
| |