| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_E0001 |
|---|
| Symbol | |
|---|
| ID | 5585828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009790 |
|---|
| Strand | - |
|---|
| Start bp | 1319 |
|---|
| End bp | 1900 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640913894 |
|---|
| Product | IS1294, transposase, truncation |
|---|
| Protein accession | YP_001451544 |
|---|
| Protein GI | 157149552 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.040816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATGC CGAAGTCGTT GTCACATATC ACGACGGAAT CACAGTGGAG AAGCCTGGTG
CTGAAAGCCG GCGGAAAATA CTGGCATGTG TACATGTCGA AGAAGACAGC CGGAGGGCGG
AATACGGCAC GCTACCTGGG TCGTTATCTG AAGAAGCCAC CAATAGCGGC TTCCCGACTG
GCTCATTACA ACGGAGGAGC GAGTCTGAGC TTCCGTTACC TGGACCACAA AACGGGAGAA
ACGGCGACGG AAACGCTGAC ACAGCGTGAG CTGGTCGCGA GGCTGAAACA GCACATCCCG
GAGAAGTTTT TTAAGATGGT GAGGTACTTC GGGTTCCTTG CCAACCGGGT GTGTGGAGAG
AAGCTGCCGC AGGTGTACCG TGCACTGGGG ATGGATAAAC CGGAACCAGT GGCGAAAGTG
TGCTATGCAC AAATGGTGAA ACAGTTCCTG AGTCGTGACC CGTTCGAATG CGTGCTGTGT
GGCGGCCGGA TGGTATACCG CCGGGCCATT GCGGGGCTGA ATGTATCAGG GCTGAAGAAA
AATGCGCGGA ATATCAGCCT GCGGAGGTAC ATCCCTGACT GA
|
|---|
| Protein sequence | MAMPKSLSHI TTESQWRSLV LKAGGKYWHV YMSKKTAGGR NTARYLGRYL KKPPIAASRL
AHYNGGASLS FRYLDHKTGE TATETLTQRE LVARLKQHIP EKFFKMVRYF GFLANRVCGE
KLPQVYRALG MDKPEPVAKV CYAQMVKQFL SRDPFECVLC GGRMVYRRAI AGLNVSGLKK
NARNISLRRY IPD
|
|---|
| |