Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_F0065 |
Symbol | |
ID | 5585620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009786 |
Strand | + |
Start bp | 55820 |
End bp | 56323 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640913777 |
Product | IS1, transposase orfB |
Protein accession | YP_001451427 |
Protein GI | 157149375 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.343111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGGCA ACAGCCCGCA TTATGGGCGT TGGCCTCAAC ACGATTTTAC GTCACTTAAA AAACTCAGGC CGCAGTCGGT AACCTCGCGC ATACAGCCGG GCAGTGACGT CATCGTCTGC GCGGAAATGG ACGAACAGTG GGGCTATGTC GGGGCTAAAT CGCGCCAGCG CTGGCTGTTT TACGCGTATG ACAGGCTCCG GAAGACGGTT GTTGCGCACG TATTCGGTGA ACGCACTATG GCGACGCTGG GGCGTCTTAT GAGCCTGCTG TCACCCTTTG ACGTGGTGAT ATGGACGACG GATGGCTGGC CGCTGTATGA ATCCCGCCTG AAAGGAAAGC TGCACGTAAT CAGCAAGCGA TATACGCAGC GAATTGAGCG GCATAACCTG AATCTGAGGC AGCACCTGGC ACGGCTGGGA CGGAAGTCGC TGTCGTTCTC AAAATCGGTG GAGCTGCATG ACAAAGTCAT CGGGCATTAT CTGAACATAA AACACTATCA ATAA
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Protein sequence | MPGNSPHYGR WPQHDFTSLK KLRPQSVTSR IQPGSDVIVC AEMDEQWGYV GAKSRQRWLF YAYDRLRKTV VAHVFGERTM ATLGRLMSLL SPFDVVIWTT DGWPLYESRL KGKLHVISKR YTQRIERHNL NLRQHLARLG RKSLSFSKSV ELHDKVIGHY LNIKHYQ
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