Gene EcE24377A_F0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_F0021 
Symbol 
ID5585684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009786 
Strand
Start bp18117 
End bp18935 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content51% 
IMG OID640913741 
ProductISSd1, transposase orfB 
Protein accessionYP_001451391 
Protein GI157149384 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCAGG TATCTGGTGT ATCCAGGAGC GGTTATTACA ACTGGGTACA GCATGAACCC 
TCAGACAGAA AACAAAGTGA TGAGCGGCTA AAACTGGAGA TTAAGGTGGC ACATATCCGC
ACTCGCGAAA CATATGGAAC CCGGCGGCTC CAGACGGAGC TGGCAGAGAA TGGCATCATC
GTTGGTCGTG ACCGACTGGC ACGTCTTCGT AAGGAGCTAA GGCTACGCTG TAAGCAGAAA
CGCAAGTTCA GAGCGACTAC GAACTCGAAC CACAATCTGC CAGTTGCGCC AAATCTGCTG
AACCAGACGT TCGCTCCTAC AGCACCAAAT CAGGTCTGGG TGGCGGACCT GACGTATGTT
GCCACACAGG AGGGATGGTT GTACCTCGCT GGCATCAAAG ATGTTTATAC GTGCGAAATT
GTCGGCTACG CCATGGGAGA GCGCATGACA AAAGAGCTGA CAGGTAAAGC CCTGTTTATG
GCGCTCAGGA GCCAGCGCCC ACCTGCCGGG CTAATCCACC ACTCTGATCG AGGTTCACAG
TACTGCGCAT ACGATTACCG GGTCATACAG GAGCAGTTTG GTCTGAAAAC ATCAATGTCG
CGTAAAGGTA ACTGTTACGA CAACGCTCCG ATGGAAAGCT TCTGGGGAAC GCTGAAAAAT
GAGAGCCTGA GCCACTATCG TTTTAATAAC CGGGATGAAG CCATCTCAGT AATACGGGAA
TACATTGAGA TTTTCTACAA TCGTCAGCGT CGTCACTCTC GTCTGGGGAA TATCTCCCCG
GCAGCCTTCA GGGAAAAATA TCATCAGATG GCTGCTTAA
 
Protein sequence
MCQVSGVSRS GYYNWVQHEP SDRKQSDERL KLEIKVAHIR TRETYGTRRL QTELAENGII 
VGRDRLARLR KELRLRCKQK RKFRATTNSN HNLPVAPNLL NQTFAPTAPN QVWVADLTYV
ATQEGWLYLA GIKDVYTCEI VGYAMGERMT KELTGKALFM ALRSQRPPAG LIHHSDRGSQ
YCAYDYRVIQ EQFGLKTSMS RKGNCYDNAP MESFWGTLKN ESLSHYRFNN RDEAISVIRE
YIEIFYNRQR RHSRLGNISP AAFREKYHQM AA