Gene VIBHAR_07111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_07111 
Symbol 
ID5558005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2180349 
End bp2182187 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content49% 
IMG OID640911577 
Producthypothetical protein 
Protein accessionYP_001449210 
Protein GI156978304 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC GATTTGAAGG CTTTACTGAG CCGTTCCCCA AATCACAGCC TGTCCAACCC 
CCAGCGGGGA TCTTTGCGTT TTTACGCCAT TACACGCGCG GTTTTGAGAA ACCGCTGATC
ATCATGTCGA TCATGTCGAC GATTGTGGCT ATCGTAGAAG TCTCTCTGTT TGGCGCCATG
GGTCAGTTGG TTGATTGGCT GTCCACCAGC AACCCAGAAA CCTTTTTGCA AGACAACAAA
ACGGACCTTA TTTTCTACGG CACCTTACTG CTGGTTATCA TGCCGATTTT GGTGGTGATT
TACTCACTGC TGATCCACCA AACTCTGCTG GGTAACTACC CAATGTCGGT TCGCTGGCTT
GCGCACCGTT ACTTGCTCAA TCAAAGTCTG AACTTCTATC AGAATGATTT TGCAGGTCGT
GTTGCGACTA AGGTGATGCA AACCTCTCTG GCGGTGCGAG AAACCGTCAT GAAGACGATG
GATGTTTTCG TCTACGTCTT GGTTTACTTC ACCAGCATCA TCGTGATGTT GGCCGCCGCT
GACTGGCGCT TGATGATCCC AATGTTGGTT TGGCTAATGG CGTACATCGC GATTCAGATC
CACTTCGTTC CGAAGCTAAA GGCCGTGGCT ACTGAGCAAG CAGATGCACG TTCAACCATG
ACAGGTCGCA TTGTAGACAG CTACACCAAC ATTCAAACCG TTAAGCTGTT CTCGCACAGT
AAACGAGAGA CCGAGTACGC CGAAGAAGGC ATGAAAGGCT TCTTGAGTAC TGTGTATCGC
CAAATGCGCT TGGTGACCGG CTTCGATGTA GCGGTAGAGA TCTCCAACTA TCTATTGGTG
TTCTCGGTGG CTGCGCTGTC GATTTATTTG TGGCTGGATA GCGCGATTAG CGTTGGTGCC
ATTGCGATTG CTGTCAGCTT AGCTCTGCGT ATCAACGGCA TGTCGATGTG GATTATGTGG
GAAGTCGGTG CCCTATTTGA AAACTTGGGT ACCGTCGTAG ATGGCATGAA GACGCTGTCT
AAACCTATCG ACATCAAAGA CAAAGCCGAT GCAAAAGATC TGCAAGTGCC TCAAGGTGGT
ATTCACTTCG ACAACGTCAG CTTCCACTAC GGTGAGAAAA AAGGCGTGAT TAACAACCTC
GACCTTAATA TCAAACCGGG TGAGAAAGTA GGCTTAGTTG GGCGGTCTGG CGCAGGTAAA
TCAACCTTAG TGAACTTGTT ATTGCGTTTC CACGATGTGG AAGAAGGCAG CATCAAGATT
GATGGGCAAG AAATCTCAAG CGTCACGCAA GATTCTCTGC GCTCGAAGAT TGGTATGGTG
ACACAAGATA CGTCCCTGCT GCATCGCTCA ATCCGCGATA ACATCTTGTA TGGCAATCCA
GATGCAAGTG AAGAGGACCT GATTAAAGCG ACCAAACAAG CGCACGCACA TGAGTTTATC
GAGACCCTAA CCGACCCGTT CGGCAACGTT GGTTACGACG CACAAGTGGG TGAGCGTGGT
GTAAAACTGT CTGGCGGCCA ACGTCAGCGT ATTGCGATTT CACGCGTGCT GCTAAAAGAC
GCACCTTTAC TGGTGCTTGA TGAAGCGACT TCAGCACTGG ATTCAGAAGT TGAAGCGGCC
ATTCAAGAGA GCTTGAACGA GCTGATGCAG GGCAAAACGG TTATCGCCAT CGCGCACCGT
TTGTCGACCA TTGCGCAGAT GGATCGCTTG ATTGTGCTTG ATAAAGGCAA CATCGTGGAG
CAAGGCACGC ACAAAAAGCT TATTGCCAAC AACGGCATTT ATGCACAGCT TTGGGCACAC
CAAACGGGTG GTTTCCTTGG GGAAGAGTTA GAGAGTTAA
 
Protein sequence
MFKRFEGFTE PFPKSQPVQP PAGIFAFLRH YTRGFEKPLI IMSIMSTIVA IVEVSLFGAM 
GQLVDWLSTS NPETFLQDNK TDLIFYGTLL LVIMPILVVI YSLLIHQTLL GNYPMSVRWL
AHRYLLNQSL NFYQNDFAGR VATKVMQTSL AVRETVMKTM DVFVYVLVYF TSIIVMLAAA
DWRLMIPMLV WLMAYIAIQI HFVPKLKAVA TEQADARSTM TGRIVDSYTN IQTVKLFSHS
KRETEYAEEG MKGFLSTVYR QMRLVTGFDV AVEISNYLLV FSVAALSIYL WLDSAISVGA
IAIAVSLALR INGMSMWIMW EVGALFENLG TVVDGMKTLS KPIDIKDKAD AKDLQVPQGG
IHFDNVSFHY GEKKGVINNL DLNIKPGEKV GLVGRSGAGK STLVNLLLRF HDVEEGSIKI
DGQEISSVTQ DSLRSKIGMV TQDTSLLHRS IRDNILYGNP DASEEDLIKA TKQAHAHEFI
ETLTDPFGNV GYDAQVGERG VKLSGGQRQR IAISRVLLKD APLLVLDEAT SALDSEVEAA
IQESLNELMQ GKTVIAIAHR LSTIAQMDRL IVLDKGNIVE QGTHKKLIAN NGIYAQLWAH
QTGGFLGEEL ES