Gene VIBHAR_07092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_07092 
Symbol 
ID5558772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp2164690 
End bp2165325 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content50% 
IMG OID640911558 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001449191 
Protein GI156978285 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTG CTGATATTCG TCGTGAGTAC ACAAAAGGTG GCCTGCGTCG TAAAGATTTA 
AAAGCAGATC CGATTGATCA ATTTAACCTT TGGTTAGAGC AAGCGGTACA AGCTGGTATG 
ACTGACCCGA CGGCGATGAC AGTCGCGACA GTCGATGAAA ATGGTATGCC GTTTCAACGC 
ATTGTGCTGC TAAAAAGTGT CGATAAAGAT GGCTTTGTGT TCTACACCAA CTTGGGCAGC 
CGCAAAGCGC AGCAGCTTGG GCATAACAGC AACATCAGCC TGCATTTCCC ATGGCACCCC 
CTTGAGCGTC AGGTTCACAT CACGGGCGTG GCAGAAAAGC TAACGCCGAT GGAGAACATG 
AAGTACTTCA CTTCTCGCCC GAAAGAGAGC CAATTAGCAG CGATCGCGAG CAAGCAAAGC 
AGCCGTATCT CTGCACGTGG CGTATTGGAA GGTAAGTTTT TAGAGCTGAA GCAGAAGTTT 
GCTAAAGGTG AGATTCCTAT GCCAACCTTC TGGGGTGGTT TCCGCGTTAA GCCACAAAGC 
ATTGAGTTCT GGCAAGGCGG TGAGCACCGT CTGCATGACC GCTTCTTGTT CTCAAATCAA 
GAAGGTGAGT GGGACATCGA CCGTCTTGCG CCGTAG
 
Protein sequence
MELADIRREY TKGGLRRKDL KADPIDQFNL WLEQAVQAGM TDPTAMTVAT VDENGMPFQR 
IVLLKSVDKD GFVFYTNLGS RKAQQLGHNS NISLHFPWHP LERQVHITGV AEKLTPMENM 
KYFTSRPKES QLAAIASKQS SRISARGVLE GKFLELKQKF AKGEIPMPTF WGGFRVKPQS 
IEFWQGGEHR LHDRFLFSNQ EGEWDIDRLA P