Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_07058 |
Symbol | |
ID | 5556556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 2133715 |
End bp | 2135394 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640911525 |
Product | hypothetical protein |
Protein accession | YP_001449158 |
Protein GI | 156978252 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATA GTGGTACTTG CTTCAAAAGA CGTGTTAGGA GAACGAAAAA CGATATGGAT TTTAAAAAGC ATTCAACAGC GTTGCTGGTT TCCTCTTTAT TTACCCCATT TTTATCCGCT TCAGCTTTAG CTGATTCTTT GCCTGATGGT GTGCAACTCG CACCGGAACA ACATTTAGTA CGAGCAAACG ATGCAGAAGC GGCGACGCTA GACCCTGCAA AAGCCGAAGG CTTACCAGAG ATGCACGTAA TTCGTGATTT GTTTGAGGGA TTAGTCATTC AAGACCGCGA TGGCAATATC GTTCCTGGTG TTGCGGAATC TTGGCAAACC GAAGACAACC AAACCTTTGT GTTCCAGCTG CGTAAAGACG CCAAATGGTC GAACGGCGAT CCTGTGACAG CGGATGATTT TGTTTATTCA CTGCGTCGTG CAGTGGATCC GAAAACTGCT TCTCCCAATG TTTGGTATCT CAAACTCACT AAGATCAAAA ACATCGCTGA CGTAGCAGAA GGTAAAAAGC CACTGGATGC TCTTGGTATC ACCGCCGTCG ATAAACATAC TCTGCGCTTC GAACTTGATA GCAAAGTGCC GTACTTTGTC GCAATGACAG GCCACACCTC GATGATGCCT GTACACAAAG CAACGGTTGA GAACAGCGAA AAGCCGTGGA GTGACCCACA GCAGTTTGTT GGTAACGGTG TATTTGTTCT GGATAAATGG GTGGTGAATG AGCGCATTGA ACTGAAAAAG AGCCCAAACT ATTGGGATAG CGCGGATACT CATCTCACTG AAGTGACATA CATTCCGTTT GAGAACCAAA ACGCATCGAT CAATCGCTAT GCGGTGGGCG AAGTGGACAT TACCTCAGAT GTACCAACCC ATATGGCGCA AAAGCTGAAG AAAGATTACG AGCAAGCGTA TACCGCGGTT CCACTACTTT GTACATATTA CTACGCGTTT AACACCACGC GTCCTCCTTT CGATGATGAA CGAGTTCGAA AAGCCGTGTC TTATTCGATG ATGCGTGATG TGATCACGAA TGGTGTCACA CAAGTAGGTA ATCTGCCTGC TTATACGTTC GCACACCAGT ACACGGCTGG CTTTGATGCG ACTCAGCCTG AATACAGCAC ATGGACGCAG AAACAGCGTG ATGAAAAGGC GCGTGAGCTG CTGAAAGAAG CAGGATACGG TGACGGTAAG GCTCTGGATT TCAAATTGCT GTACAACACC AGTGAATCGA ACAAAGCCAT TGCAGTGGCG ATTGCTTCTA TGTTGAAGAA CAACTTGGGC GCGAAAGTCG AATTAGAAAA CCAAGAGTGG AAGTCTTACC TCGTCGCTCG TAAGCAAGGC GATTTCGATG TGATGCGTGC CTCGTGGTGC GGAGATTACA ACGAAGCTTC GACCTTCTTG AGTCTACTGC GCTCTGGTTC GTCAGGTAAC TTTGCGCGTT ACAGCAGTGA AGCCTACGAT AAGGCGATGA ATAGTGCATT GGCCGCAACG GATGAGAAAG CGCGCCAAGG TTTCTATGAT CAAGCCGAGC AACTGTTGGC GGCTGATATG CCAATCGCAC CGATTTACTA CTACATGCAA GCGCGTTTGG TTCGCCCTAC GGTTGGCGGT TTTGCCAAGA ACAACGTAGA GGGTCGTATC TACTCGAAAG ACCTCTACAT CAAGAAGTAG
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Protein sequence | MMNSGTCFKR RVRRTKNDMD FKKHSTALLV SSLFTPFLSA SALADSLPDG VQLAPEQHLV RANDAEAATL DPAKAEGLPE MHVIRDLFEG LVIQDRDGNI VPGVAESWQT EDNQTFVFQL RKDAKWSNGD PVTADDFVYS LRRAVDPKTA SPNVWYLKLT KIKNIADVAE GKKPLDALGI TAVDKHTLRF ELDSKVPYFV AMTGHTSMMP VHKATVENSE KPWSDPQQFV GNGVFVLDKW VVNERIELKK SPNYWDSADT HLTEVTYIPF ENQNASINRY AVGEVDITSD VPTHMAQKLK KDYEQAYTAV PLLCTYYYAF NTTRPPFDDE RVRKAVSYSM MRDVITNGVT QVGNLPAYTF AHQYTAGFDA TQPEYSTWTQ KQRDEKAREL LKEAGYGDGK ALDFKLLYNT SESNKAIAVA IASMLKNNLG AKVELENQEW KSYLVARKQG DFDVMRASWC GDYNEASTFL SLLRSGSSGN FARYSSEAYD KAMNSALAAT DEKARQGFYD QAEQLLAADM PIAPIYYYMQ ARLVRPTVGG FAKNNVEGRI YSKDLYIKK
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