Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_07036 |
Symbol | |
ID | 5557828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 2111290 |
End bp | 2112006 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640911504 |
Product | hypothetical protein |
Protein accession | YP_001449137 |
Protein GI | 156978231 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGAA GTTTTGAAGT GCGCAAAGCC TCTATGGCGA AAACTGCAGG CGCAAAAATT AAAGTTTATT CCAAATACGG TAAAGAAATT TACATGTGCG CGAAAAACGG TGGTGGTGAT CCAGACATGA ACTTGTCTTT GAAGCACCTG ATCGCAAAAG CGAAAAAAGA CCAAGTTCCT GCACACGTTA TCGATAAAGC GATCGACAAA GCGAACGGCG GCGGTGGTGA AGACTACACA CCAGCACGTT ACGAAGGCTT TGGCCCTGGC GGCACAAGCG TGATCGTAGA CTGTCTAACA GACAACGGTA ACCGTACATT CCAAGACGTT CGCCAATGCT TTGTTAAAGT GGGTGCGAAA ATTGGTGTTG AAGGTTCGGT TTCTCACATG TTCGATCACC AAGCGGTATT CCAGTTCAAA GGCGAAGATG ATGAAATCAT CCTAGAAACG CTAATGATGG AAGACGTGGA CGTTACTGAC GTTGAGCTAG AAGACGGTGT TATCACTGTA TTCGCACCTC ATACAGAGTT CTTCAAAACA AAAACTGCGC TTAACGGTGC ATTCCCAGAT CTAACGATCG ACGTTGAAGA AATCACATTC GTTCCGCAAA CTCACACGCC AGTAGCGGGT GAAGACGCAG AGAAATTCCA GAAGTTCCTA GACCTTCTAG ATGACTGTGA CGACGTTCAA CAGGTATACC ACAACGGCGA ACTGTAA
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Protein sequence | MGRSFEVRKA SMAKTAGAKI KVYSKYGKEI YMCAKNGGGD PDMNLSLKHL IAKAKKDQVP AHVIDKAIDK ANGGGGEDYT PARYEGFGPG GTSVIVDCLT DNGNRTFQDV RQCFVKVGAK IGVEGSVSHM FDHQAVFQFK GEDDEIILET LMMEDVDVTD VELEDGVITV FAPHTEFFKT KTALNGAFPD LTIDVEEITF VPQTHTPVAG EDAEKFQKFL DLLDDCDDVQ QVYHNGEL
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