Gene VIBHAR_07029 details

Gene Information

• Locus tag: VIBHAR_07029
• ID: 5558638
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: -
• Start bp: 2105236
• End bp: 2105934
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640911497
• Product: ABC-type transporter ATPase component
• Protein accession: YP_001449130
• Protein GI: 156978224
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGTTT TTAATCAACT TAGTCGCGAT TACGCCCTTG GCAGCCAAAC GGTGCGTGCC 
TTGCGAGAAG TGTCTGGTGA AGTGTTTTCC GGCGAAATGG TGGCTCTGTG CGGGCCGTCT 
GGTTCAGGCA AAAGCACCTT ACTTAACGTG CTTGGCATGC TGGATACTCA ATACCAAGGT 
CAGGTGACAT TTGCGGGCAG CCCATACCCA ACTGGGCAAA TGCAGGCGGC GAAAATGCGC 
CGAGAAAAGC TTGGCTTTAT ATTTCAAAAA TTCAATCTTG TGCCTGTGAT GACAGCGTTG 
GAGAACGTGG CGTATCCGCT ACATCTCAAC GGCTTCTCAA AAGCAGAACA AACTGAGCTC 
GCTACACAAA TGCTAGAACA CGTTGGCTTG GGCGAGTTTA TTCATTATAT GCCCGATAAC 
TTGTCGGGCG GTCAGCAACA ACGCGTGGCA ATTGCTCGAG CGTTAGTACA CAAACCAGCA 
CTGGTGATTG CTGATGAGCC AACCGCAAGC CTTGATAGCC AAACGGCCAA CAAGGTCATC 
GACATTATGA AAGGGCTCGG ACACGAGCTA GGCACCACTT TTATCGTCGC TACACACGAC 
CCTCGAATGG CATCCCGCTG CGATCGAACC ATTGAGTTGG TAGATGGCAA GATTACCCAA 
ACGGACGCGA GTGTGGAGGA GGTTTCATGG GCAAGCTAA 

 

Protein sequence

MIVFNQLSRD YALGSQTVRA LREVSGEVFS GEMVALCGPS GSGKSTLLNV LGMLDTQYQG 
QVTFAGSPYP TGQMQAAKMR REKLGFIFQK FNLVPVMTAL ENVAYPLHLN GFSKAEQTEL 
ATQMLEHVGL GEFIHYMPDN LSGGQQQRVA IARALVHKPA LVIADEPTAS LDSQTANKVI 
DIMKGLGHEL GTTFIVATHD PRMASRCDRT IELVDGKITQ TDASVEEVSW AS