Gene VIBHAR_07014 details

Gene Information

• Locus tag: VIBHAR_07014
• ID: 5558026
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 2092594
• End bp: 2093121
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640911482
• Product: 23S rRNA methyltransferase
• Protein accession: YP_001449115
• Protein GI: 156978209
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0219] Predicted rRNA methylase (SpoU class)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCAC AGTCAACGGT CATTCTTGGA CTGTATAACC CTAAAGATCC AACCAATGTG 
GGCGCGGTGA TGCGCGCAGC AGGGTGTTAT GACGCCACGC AAGTTCGTTA TAACGGCACT 
CGCTATAATC GTGCGGCAAA ATTCCGAACC GACACCAAGA ACATGCACGA ACGTATCGAT 
TTGGTCGAAA TGGACGATCT CACTGCTCAT CTTGCTGAAG ACGTGAAAGT GGTGTGTGTT 
GAGTTGGCCG TCGGCGCTAC AGCGTTGCCT CTTTTTGCAC ACCCAGAAAA CGCGGTGTAT 
ATCTTTGGCC CTGAAGATGG CTCACTTCCG CAAGAGGTTG TCGATAAGGC CGATCACGTG 
GTGTATGTAC CCACCAATGG CTGCATGAAC TTGGCGGCAA CAGTCAATGT TGTCTTGTAT 
GATCGTTTGG CGAAAAACCT TGGCACGATT GACGACCATC AACAAGTGAT GGCTAACCGA 
GACAACAAGA ATCGATTGAA GGTCAAAGAC TGCGTAACAG CGCAATAA 

 

Protein sequence

MTAQSTVILG LYNPKDPTNV GAVMRAAGCY DATQVRYNGT RYNRAAKFRT DTKNMHERID 
LVEMDDLTAH LAEDVKVVCV ELAVGATALP LFAHPENAVY IFGPEDGSLP QEVVDKADHV 
VYVPTNGCMN LAATVNVVLY DRLAKNLGTI DDHQQVMANR DNKNRLKVKD CVTAQ