Gene VIBHAR_07006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_07006 
Symbol 
ID5557542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2086030 
End bp2086887 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content50% 
IMG OID640911474 
Producthypothetical protein 
Protein accessionYP_001449107 
Protein GI156978201 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAT TAGTCAGTGT AAAACACGTC TCCAAGCAAT ATCGTCAGCA GGGTGAAGCA 
CTGCATGACG TGAGCTTTGA TCTACAAGCG GGTCAGGTGC TTGGCTTGCT AGGTCATAAC
GGTGCGGGTA AATCGACTCT CATTAACGCC CTACTCGGTG CACACGAATA TCAGGGCACC
ATTCGCATCA ACGGCTTTGA GCCAATCATG CAACGCGACA AAATCATGCA GAGCTTATCT
TACATTTCGG ATGTGAACGT TCTGCCAAAC TGGATGACGG TTGCTCAGCT GCTCGATTAC
ACCGAGGGCG TACACCCAGG TTTTAATCGC AGCAAAGCCG ATGCCATGCT TCGTCAAACC
GATATCAAGC CGCGTGCACG CATCAAATCC CTATCGAAAG GCATGAAGGT GCAATTGCAC
TTGGCTGTCG TCATCGCGAC CCATACGCAG ATTCTGATTC TAGACGAGCC AACGCTTGGC
CTGGATTTGG TTTATCGCGA TACCTTCTAC CGTCATTTGC TGGAATGGTT CCACGATGGC
GAGCGTGTGT TGATCATAGC GAGCCATGAA GTATCGGAAA TCGAACACCT ACTGACGGAC
GTGCTGATCC TTAAACACGG CCGACCTGTT CTGCAAACCT CAATGGACAA CATCAGCGAA
GATTACTTCA TTCTCGATGC CAGTGATGAT CATCGCGCAC AAATCGAAGC GCTGAAACCA
CTGTCATCGC AAAAAGGCGT AGGCACGACT AAATGGTTGC TGTCGTCCCA ATACGCAGAG
CAAGTTGCAG GTCTGGGTGA TGTGTATGGC GTCAAGCTTG CGGATCTGTT CTTGGCATTG
CAGAAGGAGG CAGCATAA
 
Protein sequence
MSALVSVKHV SKQYRQQGEA LHDVSFDLQA GQVLGLLGHN GAGKSTLINA LLGAHEYQGT 
IRINGFEPIM QRDKIMQSLS YISDVNVLPN WMTVAQLLDY TEGVHPGFNR SKADAMLRQT
DIKPRARIKS LSKGMKVQLH LAVVIATHTQ ILILDEPTLG LDLVYRDTFY RHLLEWFHDG
ERVLIIASHE VSEIEHLLTD VLILKHGRPV LQTSMDNISE DYFILDASDD HRAQIEALKP
LSSQKGVGTT KWLLSSQYAE QVAGLGDVYG VKLADLFLAL QKEAA