Gene VIBHAR_06943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06943 
Symbol 
ID5557477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2038130 
End bp2039134 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content48% 
IMG OID640911411 
Producthypothetical protein 
Protein accessionYP_001449044 
Protein GI156978138 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGACGA TTAAAGATGT GTCTGAATAC GCTGGCGTTT CTCAAGCGAC CGTTTCTAGA 
GTCATTAACG GCACTTGCCG CGTTAGCCAT GACAAAAAGC TTAAAGTCGA AAAAGCGATC
AAAGAGTTAG GATATCGTCC AAACTCTATT GCACAGGCAT TAGCCTCAAG CCGCACTGGC
AGTATTGGCA TTATCGTTCC TGAACTAGGT GGTCCATTTT ATTCGGGCAT CTTACATAGC
ATTGAAGAGC GCTTACGCCG CATGGGTTAC CACGTGATAG TGACGGCGGG ATCGAATACG
GAACAAAGCC AGCGAGAATC GGTAGAGTTT CTGCTTGGTC GCCGTGTTGA TGCGATGATT
CTGCACACAC AAAGCCTTTC TGATGATTAT CTGATCGACC TCGATAACAA AGGGATTCCA
GTAGTGCTGG TTAACCGATA CATCCCTGAA ATGGCTCATA GCTGTATCGA GATCGATAAC
GAATTTGGTG GCCGAATGGC GACTGAATAC TTGTTGCGAA TGGGGCATCG TAACATTGCA
TGTATTACCG GACCTCTGGA CAGATCTGAC GCACGGGGGC GTCTACAAGG TTACCGCAAG
GCTCTTGAAG AAGCGGAAAT TGCGTATGAC GAAGCGTTAG TGTCCGAGGC CGGTTTTACA
GAAGAATCTG GTATCAGTGC GATGCGCAAA TTGCTTAAGC GTGAAAGCGG TTTCACTGCA
GTGTTTGCTT GTAATGATCA CATGGCGTTT GGTGCTTATG AAGTCTTGAA AGCAGAAGGT
ATGCAGGTGC CAGAGCAAAT CTCTCTCGTA GGATTTGATG ACATCTTGTT TGCTCGCTAT
CTCACGCCAG CCCTTACCAC GGTTAACTTC CCGATAGAAC AGATGAGCGC AGAGGCGGTA
CAACTTGTCA TCCAAGCGCT GAACAAGAAC AAACGTGATG TGAACTTCAA ACTCACTCCT
ACCCTAGTGC CAAGAAGTTC GGTCAAGGAA CTCAATACTC TCTAG
 
Protein sequence
MATIKDVSEY AGVSQATVSR VINGTCRVSH DKKLKVEKAI KELGYRPNSI AQALASSRTG 
SIGIIVPELG GPFYSGILHS IEERLRRMGY HVIVTAGSNT EQSQRESVEF LLGRRVDAMI
LHTQSLSDDY LIDLDNKGIP VVLVNRYIPE MAHSCIEIDN EFGGRMATEY LLRMGHRNIA
CITGPLDRSD ARGRLQGYRK ALEEAEIAYD EALVSEAGFT EESGISAMRK LLKRESGFTA
VFACNDHMAF GAYEVLKAEG MQVPEQISLV GFDDILFARY LTPALTTVNF PIEQMSAEAV
QLVIQALNKN KRDVNFKLTP TLVPRSSVKE LNTL