Gene VIBHAR_06941 details

Gene Information

• Locus tag: VIBHAR_06941
• ID: 5557475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: -
• Start bp: 2036860
• End bp: 2037549
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640911409
• Product: ABC-type sugar transport system periplasmic protein
• Protein accession: YP_001449042
• Protein GI: 156978136
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1653] ABC-type sugar transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCACAAG CGATCATCTT CACCACAGTT CCTGAAGGTG AAGGTCTGTA CTTCGACAAA 
GACGGCAACC CAGTCGTGAC TTCTGAGCGA TTTGTGCACG CGTTCGAAGT GGCAAAAGAA 
ATCCGTGACA AAGGCTTGGA TGGTCGCATT CTAGCGTGGT CAAACGAATG GTACGAAGGC 
TTCCGTAACG GCACATTTGC GACTCAGCTT TCTGGTGCTT GGCTACTTGG TCACCTAAAC 
AACTGGATTG CGCCAGAAAC AGCAGGCAGC TGGGGCGTGT CTAACCTTCC TGATGGTATT 
TACGGAAGCT GGGGCGGCTC ATTCCTATCG ATTCCAACCC AATCTAAGCA CCAAGATGAA 
GCGTGGAAGC TAATTGAATA CATGACAACC AAGCGTGAAA TTCAGCTTAA ACACTTCGAA 
ACCATTGCAG CATTCCCTGC GAACACCACG ACTTACGACG ACCCAATGTT CGAAGAGAAA 
ATCGAATTCC TAGGTGGTCA GCAAGCGCGT CTATTGTTTG CTGAAGTGGC GCAGAACATC 
AAGCCAGTGG CACCAGCGAA AGGCGATCAC GTTGCTCGTT CTATCATCCT AGAGAATGCA 
CTGATGGAAG TGTTGGATGA AGGTAAAGAC ATTAAGACTG CGCTTAAAGA AGCAGAGCGC 
ATGATCAAGC GTCGTACGCG TAATCTGTAA 

 

Protein sequence

MAQAIIFTTV PEGEGLYFDK DGNPVVTSER FVHAFEVAKE IRDKGLDGRI LAWSNEWYEG 
FRNGTFATQL SGAWLLGHLN NWIAPETAGS WGVSNLPDGI YGSWGGSFLS IPTQSKHQDE 
AWKLIEYMTT KREIQLKHFE TIAAFPANTT TYDDPMFEEK IEFLGGQQAR LLFAEVAQNI 
KPVAPAKGDH VARSIILENA LMEVLDEGKD IKTALKEAER MIKRRTRNL