Gene VIBHAR_06939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06939 
Symbol 
ID5556773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2034921 
End bp2035805 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content51% 
IMG OID640911407 
Producthypothetical protein 
Protein accessionYP_001449040 
Protein GI156978134 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTA ACACTTTACC TGCGGCGCAG CGTTGGCGTC CTAGCGATCG CAGCATCGAG 
ATCTTTACCA AGATACTGAT GGTGATGCTC GGCACTGTGT TGGTGGTGTC TGCCATCATG
ACTGTGTTCC CATTCATTTG GTCGGCGTTG CTATCGACGC GTGACCGTAC TGAAATCTTC
GGCACAGGCA TCAGCTTTGC GATTGGTGAC AGCCTTGCGG TGAACTACGC AAAGCTACTG
GAAATCATGC CGTTCTGGCA GGCGATGTTT AACTCCATCT ACATCGCGTT CCTAGGCACC
ACGATTTCAC TGCTGTTTTG TAGCATGGGC GGCTATGCGT TTGCAGTCTA CAAGTTCAAA
GGCAAAAACG TGCTGTTTGG TATGTTGGTT GGCTCGATGA TGATTCCACC TGTACTGAGC
TTGATCCCGT ACTTCATGAT CGTGAAATTC CTCGGCTTGC TCGATAACCA CCTTGCGGTT
TGGTTACCGT TCACCACCAC GCCATTTGGC ATCTTCTTGA TGCGTCAGCA CGTGGTGGCA
TCGATTCCGA AAGAGCTGTT AGAAGCGGCG AAGCTCGATG GCGCGGGTGA ATTTAGAACT
TACTGGAGCG TGGTATTGCC ACTGATGAAA CCGGCGCTCG CAACCCTAGC AATCGTGCAG
TTTGTTTTCT TCTGGAACAT GTTCATGCAG CCACTTGTGG TACTGACAAC GCCAGAAAAC
TACGTGATTA CGCAGGCACT GCGAAGCGTG CAGGGCATTC CGAATACGCC GTGGGGAGCG
GTGATGCTCG GAACCACCAT CTCCATTTTA CCGTTAGTGA TTACTTACTT ATTTGCCTCA
AAACAGATGA TCAGCGGCTT GACCTCTGGT GCCGTCAAGG GCTAA
 
Protein sequence
MSTNTLPAAQ RWRPSDRSIE IFTKILMVML GTVLVVSAIM TVFPFIWSAL LSTRDRTEIF 
GTGISFAIGD SLAVNYAKLL EIMPFWQAMF NSIYIAFLGT TISLLFCSMG GYAFAVYKFK
GKNVLFGMLV GSMMIPPVLS LIPYFMIVKF LGLLDNHLAV WLPFTTTPFG IFLMRQHVVA
SIPKELLEAA KLDGAGEFRT YWSVVLPLMK PALATLAIVQ FVFFWNMFMQ PLVVLTTPEN
YVITQALRSV QGIPNTPWGA VMLGTTISIL PLVITYLFAS KQMISGLTSG AVKG