Gene VIBHAR_06904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06904 
Symbol 
ID5556791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp2003354 
End bp2003995 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content45% 
IMG OID640911373 
Productouter membrane protein W 
Protein accessionYP_001449006 
Protein GI156978100 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAATCAGCAG TTTAGCAGTG GTTGCCGCGT TAGTGTCTCC AAGTGTTTTC 
GCTCACAGTG AAGGTGACTT TATTCTACGT GTTGGTGCGG CATCGGTTGT ACCAAACGAC 
AGCAGTGACA AGATCTTGGG TTCTCAATAT GAGTTAGAAG TTAATTCAGA CACCCAGCTG 
GGTTTGACGT TTGGTTACAT GTTTACCGAC AACATCAGCT TAGAGGTTCT AGCTGCGACA 
CCATTTAGCC ACGATATCTC TACTGATTTG GTTGGCAAGG ATATCGGTAG CACCAAACAC 
TTGCCACCTA CAGTAATGGT TCAATACTAT TTTGGTGACT CACAAAGCAA ATTCCGCCCG 
TACGTGGGTG CGGGTCTGAA CTACACCATC TTCTTCGATG AAGGCTTTAA CAGTACAGGT 
AAAGGTGCGG GACTTTCTGA TCTGAAATTG GATGATTCAT TCGGTCTAGC TGCCAACGTT 
GGTTTGGACT ACATGATCAA CGATAAATGG TTCCTAAACG CATCGGCGTG GTATGCAAAC 
ATTGAAACAG AAGCGACCTA CAAAGCGGGT GGCGCGAAAC AAAAAACTGA CGTTGAAATC 
AACCCTTGGG TATTCATGAT CAGCGGCGGT TACAAGTTCT AA
 
Protein sequence
MKKTISSLAV VAALVSPSVF AHSEGDFILR VGAASVVPND SSDKILGSQY ELEVNSDTQL 
GLTFGYMFTD NISLEVLAAT PFSHDISTDL VGKDIGSTKH LPPTVMVQYY FGDSQSKFRP 
YVGAGLNYTI FFDEGFNSTG KGAGLSDLKL DDSFGLAANV GLDYMINDKW FLNASAWYAN 
IETEATYKAG GAKQKTDVEI NPWVFMISGG YKF