Gene VIBHAR_06871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06871 
Symbol 
ID5557769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1979606 
End bp1980142 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID640911340 
Producthypothetical protein 
Protein accessionYP_001448973 
Protein GI156978067 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCAAG ATATCCTGAC TTTCTGGTTT GAAGAACTGG AACCAAAAGA CTGGTTTGTG 
AGCAACGCCG ACGTCGATAA ACAAATCGAA ACGCGCTTTC TCACCACCTT AGAGCAAGCC 
GCTCAATCTG AATTGTTTGA CTGGCGAGAG ACAGCGCAAG GTCGACTCGC AGAGATCATT 
GTGCTCGACC AATTCTCTCG CAATGTTTAC CGCAATACAC CCAAAGCATT CGCTCAAGAT 
GCCCTCGCGC TTGCCTTGGC ACAAGAGGCA ATTCGTTTAG GCTTAGACCA AGAATTGACG 
GACGTTGAAC GCAGCTTCTT GTACATGCCA TTTATGCACA GTGAATCTAA GCGAATTCAT 
GAAGAGGCAG AGAAGCTGTT CAAAGCTCTT GGGCGAGAAT CTAATTACGA GTTCGAGCTA 
AAGCATAAAG TGATCATCGA TCGCTTTGGT CGCTACCCAC ACCGCAATAC GATTTTAGGC 
CGTGATAGCA CCGCAGAAGA AGTGGAATTC TTACAACAGC CGGGGTCCAG TTTTTAA
 
Protein sequence
MYQDILTFWF EELEPKDWFV SNADVDKQIE TRFLTTLEQA AQSELFDWRE TAQGRLAEII 
VLDQFSRNVY RNTPKAFAQD ALALALAQEA IRLGLDQELT DVERSFLYMP FMHSESKRIH 
EEAEKLFKAL GRESNYEFEL KHKVIIDRFG RYPHRNTILG RDSTAEEVEF LQQPGSSF