Gene VIBHAR_06846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06846 
Symbol 
ID5557699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1956601 
End bp1959048 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content50% 
IMG OID640911315 
Producthypothetical protein 
Protein accessionYP_001448948 
Protein GI156978042 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATT TAACTCGTCG CGGATTTCTA AAAGGCACTG GTCTTACTGC TGGTGCACTC 
GCATTCACTT CAATGACACC GGTGAGCGCG CTAGCGTCTG ATAAGCGTGG TTCAGGTGTA
CTTACAGCGG GTCGTATGGG CCCAATGCTG TGTGAAGTAA AAGACGGTAA GCTGGTTTCA
ACCACGAACG CATTACCACA AACGGTACCA AACAGTCTTC AAACTACGGG CCCTGACCAA
GTTCATACTA AAGCTCGTGT TAAGTACCCA ATGGTACGTA AAGGCTACTT GGCAAACCCA
TCAGCGCCAG AAGGCGTGCG TGGTAGCGAT GAATTCGTTC GCGTGTCTTG GGATGAAGTT
TATAAACTGA TTCACGAACA ACACATGCGC ATTCGTAAAG AGCACGGTGC TGAATCGGTG
TTTGCTGGTT CTTACGGTTG GCGTTCAAGT GGTGTGTTGC ACAAAGCACA AACACTTCTA
CAACGTTACA TGAGCATGGC GGGCGGTTAC TCAGGTCACC TTGGTGACTA CTCTACGGGT
GCTGCGCAGG TCATCATGCC GCACGTGGTA GGCTCTATTG AAGTTTACGA ACAGCAAACC
ACTTACCCAG TGGTTCTTGA GCACAGTGAC GTTGTGGTGC TTTGGGGTCT TAACCCAATC
AACACGCTGA AAATCGCATG GAGCTCAACA GACTGTGCGG GCCTAGAGTT TTTTCATCAG
CTTAAGAAGT CAGGTAAGAC GGTTATCGCT ATCGACCCAA TGCGTTCAGA GACCATCGAG
TTCTTCGGTG ACAACGCACA ATGGATTGCT CCGCACCCTA TGACGGACGT GGCGATGATG
ATGGGTATCG CGCATACGCT TGTGAAACAA GGTAAGCACG ACAAAGAATT CCTAGCAAAA
TACACCACAG GCTACGACGT ATTCGAAGCT TACCTAATGG GTAAAGAAGA CGGCGTTGAG
AAATCTGCAG AGTGGGCATC TAAGATTTGT GGCGTGCCAG TTAAGCAACT TGAGCTGCTT
GCAGACATCT TCAGCAAAAA CCGCACAATG CTAATGGCGG GCTGGGGTAT GCAGCGCCAG
CAATACGGTG AGCAACGTCA CTGGATGCTG GTAACACTAG CAACCATGCT GGGTCAAGTT
GGTCTACCGG GTGGTGGTTT TGGTTTCTCT TACCACTACT CAAACGGCGG TAACCCTTCA
CGTGATGCGG GTGTACTTCC TGCTATTTCT GCGTCTCTAG GCGGCGGTTC TTCTGCAGGT
AACGACTGGG CGGTTTCTGG TTCTGTTAAC GCGTTCCCAG TGGCACGTAT TGTTGAAGCG
CTAGAAAACC CAGGCATGAG CTACCACCAC AATGGTCATG AGTTAACGTT CCCTGAGATC
AAGATGATTT GGTGGGCAGG CGGTGCGAAC TTTACGCACC ACCAAGACAC TAACCGTTTG
ATAAAAGCGT GGCAAAAACC AGAGCTTATC GTTATCTCTG AACCATACTG GACAGCGGCA
GCGAAGCACG CGGATATTGT TCTACCTATC ACCACATCGT TCGAGCGTAA CGATATGACC
ATGACAGGTG ACTACAGTAA CCAACACCTA GTGCCGATGA AGCAAGTGAT TGAGCCTCAA
GGTGAAGCTC GTAACGACTT TGATGTATTC GCGGACATGG CAGAACTACT TGCTCCGGGT
GGTCGTGATG TTTACACCGA AGGCAAGACT GAAATGGAAT GGCTGTACGG CTTCTACAAA
GCGGCTCAGC AAGGCGGTCG TGGCCAACGT ATCGCAATGC CAAACTTCAG CAAATTCTGG
GAAGATAACC AGTTGATCGA AATGAAGTGG AACGAGAAGA ACGCGCAGTT TGTTCGTTAC
GCAGAATTCC GTGAAAACCC AATCATGAGC CCACTAGGTA CGCCAAGTGG TAAGTTCGAG
ATCTTCTCTA AGACAATTGA AGGCTACCAG TTAGAAGACT GTCCTCCACA CCCAACTTGG
ATGGAGCCAA CAGAATACAC GGGCAATGCC ACTGATGGTG AGCTTCAGCT AATGACGGCG
CACGCCGCGC ATCGTCTGCA CAGCCAGTTC AACTACGCGA AGATTCGTGA AGAGTACGCG
ATTGCTGACC GTGAGCCGAT TTCAATCCAC CCAGAAGACG CAAAAGCGCG TGGTATTAAG
ACCGGCGATC TTGTTCGTGC CTTCAACGGC CGTGGTCAAG TTCTGGTTGG TGCATTGGTT
ACCGATGGCA TCAAGCAAGG CTCAGTATGT ATCCACGAAG GTGGCTGGCC AGATCTAGAC
CCTAAAACAG GCATCTGTAA AAACGGTGGC TGTAACGTTC TAACGCTTGA TATTCCAACC
TCTCGCCTTG CGAACGGTTG TGCGGCGAAC TCTGCATTGG TTCGTATCGA GAAGTACGAA
GGCCCAGTGC TTGAGCTAAC CGCATTCACA CCGCCTAAGA ACGGTTAA
 
Protein sequence
MTNLTRRGFL KGTGLTAGAL AFTSMTPVSA LASDKRGSGV LTAGRMGPML CEVKDGKLVS 
TTNALPQTVP NSLQTTGPDQ VHTKARVKYP MVRKGYLANP SAPEGVRGSD EFVRVSWDEV
YKLIHEQHMR IRKEHGAESV FAGSYGWRSS GVLHKAQTLL QRYMSMAGGY SGHLGDYSTG
AAQVIMPHVV GSIEVYEQQT TYPVVLEHSD VVVLWGLNPI NTLKIAWSST DCAGLEFFHQ
LKKSGKTVIA IDPMRSETIE FFGDNAQWIA PHPMTDVAMM MGIAHTLVKQ GKHDKEFLAK
YTTGYDVFEA YLMGKEDGVE KSAEWASKIC GVPVKQLELL ADIFSKNRTM LMAGWGMQRQ
QYGEQRHWML VTLATMLGQV GLPGGGFGFS YHYSNGGNPS RDAGVLPAIS ASLGGGSSAG
NDWAVSGSVN AFPVARIVEA LENPGMSYHH NGHELTFPEI KMIWWAGGAN FTHHQDTNRL
IKAWQKPELI VISEPYWTAA AKHADIVLPI TTSFERNDMT MTGDYSNQHL VPMKQVIEPQ
GEARNDFDVF ADMAELLAPG GRDVYTEGKT EMEWLYGFYK AAQQGGRGQR IAMPNFSKFW
EDNQLIEMKW NEKNAQFVRY AEFRENPIMS PLGTPSGKFE IFSKTIEGYQ LEDCPPHPTW
MEPTEYTGNA TDGELQLMTA HAAHRLHSQF NYAKIREEYA IADREPISIH PEDAKARGIK
TGDLVRAFNG RGQVLVGALV TDGIKQGSVC IHEGGWPDLD PKTGICKNGG CNVLTLDIPT
SRLANGCAAN SALVRIEKYE GPVLELTAFT PPKNG