Gene VIBHAR_06842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06842 
Symbol 
ID5557695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1953459 
End bp1954127 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID640911311 
Producttranscriptional regulator 
Protein accessionYP_001448944 
Protein GI156978038 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC AAGATTTGAT CGACGCTTGC CGCCAAGATT GGCAAGAATA CACTGAGCAT 
GCTTTCGTGC AGCAATTGGC AAAAGGCACT CTGGCTCAGC CTTGTTTTCT GCATTACCTA 
AAACAGGATT TTCTTTTCCT AAAACAGTAC GCACGAGCTT ACGCATTAGC GATCTACAAA 
GCACGTACTT TGGATGACAT GCGCCGCGCT CTCCCAAGCG TACATGCATT GCTCGATTCT 
GAAATCGCCC ACCACGTGAC TTACTGTGAG CAATGGGGAC TGACAGAATC CGACCTAGAA 
AACGAGCCAG AAGACTTCGG CACTGTGGCT TACACCCGCT ATGTATTGGA TGCTGGCATG 
ACCGGCGATC TTGTTGATCT TTACGCAGCA CTTGCTCCTT GTTCTATCGG TTATGCAGTT 
ATCGGTAAGA TGCTGATTGA AGATGAAAAG ACAGTAATCG AAGGCAACCC ATACGCAAGT 
TGGATCAACC TCTACGGTGG TGAGGAATTC CAATCTGGTG TCGCAAAAGG TGCAGAACAC 
TTTAATCAGT TATTGGCGGA AATCGATATC AATAGCCAGC GTGGTCAAAA CCTGATTCAG 
GTATTCAAAA TCGCAACACG TATGGAAGTG GCATTCTGGC AACAAGGCCT AAACGCTCAG 
CAAGATTAA
 
Protein sequence
MKYQDLIDAC RQDWQEYTEH AFVQQLAKGT LAQPCFLHYL KQDFLFLKQY ARAYALAIYK 
ARTLDDMRRA LPSVHALLDS EIAHHVTYCE QWGLTESDLE NEPEDFGTVA YTRYVLDAGM 
TGDLVDLYAA LAPCSIGYAV IGKMLIEDEK TVIEGNPYAS WINLYGGEEF QSGVAKGAEH 
FNQLLAEIDI NSQRGQNLIQ VFKIATRMEV AFWQQGLNAQ QD