Gene VIBHAR_06825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06825 
Symbol 
ID5558615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1937870 
End bp1939030 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content43% 
IMG OID640911293 
Productintegrase 
Protein accessionYP_001448934 
Protein GI156978028 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTACCA AAGAAAGGCG CATCGCTTGT CTGCGCAACG TTGACCAAAC AAAGATCATA 
CTCTCCCTTT TTGAACACGC TAATGCACAA GATCTTCCGT TTGTTGAATT TAAACTTTCT 
CTGAACGAGC AGATCAACCA GCTTCGCGAG CAATTTAACC AAAAAACCCA AGGCGACATT 
TCTGCTCAAA TACCAACACT GACTAATTGC TCTTCTCCAC AAAAGCATTC TTCTGAAGTC 
GATACAGAAA CACTCGAAGA TTTTATCCAA TCAAAAAGCG TTGAGAGCGT AACAGCGCTT 
ACGCTAAAGC AACTGAGGCA GCGTTGTAGA GACTTCCTTC TTTTTGTTGA AAAGCAGCCT 
GCATCGAAGA TGACGAGTAA ACTAGCAATG GCATATCGAG ATGAGCTGTT GAGCCGAGAC 
TTAAGTTTGA AAACGATTAA AGACTATATC GCTGCCATTA AGCAATTTCT TAGCTGGTGC 
GTTGTTCAAG AACTTTTAGA GCATAACCCT TTTTCTAACG TTAAACTTCC CTCAAAACCT 
GCCTCGTCTT CTTCCCAGCG CCCGCGCTGG GGTATGCAAG AATTAAAACG ATTGTTCGGA 
AGCCAGATTT TCAAAGAGCA ATCACAATCT TTCCACTGGG CGACTTTAGT GATGTTTTAT 
CAAGGGTGTC GCCCTTCCGA AGCCTGTCAG CTTAAGGTCA AGAACATTCA TTTAGACGAA 
GACATCCCTT TTATTCATTT TGATGACTCT GGCGAGCAGC AACATCTCAA AAATGCAGCT 
TCGAACCGCT GTGTCCCCAT CCATCAGGCA CTGATGGATA AAGAATTTTT GAATTACGTT 
CGTGAACGGC AGGAACAAAG ACAAACACAG CTTTTTGACT ATATTCCGCG AGGTGATGAC 
TTGGATTGGT CAAAGGACTA TCGCGACATA ATGGGCGATA TCTTGGATGC CTGTGGTTTT 
GTTGCTGGAA ATCGAGCGAC AGCTTACTCT TTTCGTCACA CATTTATTGA TGAGCTAAAG 
CAAGCAGGAG TGGCAGAACA CGTTGTCGCA CAGATTGTCG GTCACAAGAC ACATAGTCTG 
ACTTATGGGC ATTACGGGAA ACCACTGCCC TTAAAAGAGC TTGTGAACGC GGTTAATTGC 
TTTTGCTTAG ACCCTTTTTA A
 
Protein sequence
MFTKERRIAC LRNVDQTKII LSLFEHANAQ DLPFVEFKLS LNEQINQLRE QFNQKTQGDI 
SAQIPTLTNC SSPQKHSSEV DTETLEDFIQ SKSVESVTAL TLKQLRQRCR DFLLFVEKQP 
ASKMTSKLAM AYRDELLSRD LSLKTIKDYI AAIKQFLSWC VVQELLEHNP FSNVKLPSKP 
ASSSSQRPRW GMQELKRLFG SQIFKEQSQS FHWATLVMFY QGCRPSEACQ LKVKNIHLDE 
DIPFIHFDDS GEQQHLKNAA SNRCVPIHQA LMDKEFLNYV RERQEQRQTQ LFDYIPRGDD 
LDWSKDYRDI MGDILDACGF VAGNRATAYS FRHTFIDELK QAGVAEHVVA QIVGHKTHSL 
TYGHYGKPLP LKELVNAVNC FCLDPF