Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06798 |
Symbol | |
ID | 5557400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1918829 |
End bp | 1920298 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640911266 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_001448908 |
Protein GI | 156978002 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTTCAA AAGAGATTAG TGCCTCTCCT GACAGTGCTC AGTGGTCATC CATAAATTGG AAAGCCGTTG AATCCCATGT TTTAAAGCTT CAGATGCGTA TTGCAAAGGC AACACGAGAA GGTAAACACG GCAAAGCGAA AGCATTGCAG TGGATACTGA CTCACTCGCG CTCAGCAAAA CTTCTTGCTG TTAAGCGGGT ATCACAAAAT AAAGGCAGTA AAACGCCTGG AATTGACGGC GTTATCTGGA ATACAGATAC GCGCCGCATG AAAGCAGTCA ATCAATTGAG CAGAAAAGCT TATCTAGCCA AACCGCTCAA GCGTATCTAC ATCCCCAAGA AAAACGGCAA ACTCAGACCA CTGGGTATCC CCTGTATGGT CGATAGAGCG CAGCAAGCGC TTCATCTTCT TGCACTAGAG CCAGTATCAG AAACACTTGC CGATCCTAAC AGCTATGGAT TTAGACCAAA TCGAAGCACT GCTGATGCTA TCGCGCAGTG CTTCAAGTGT CTGGCACTAA AGAAATCAGC TCAGTGGGTA CTTGAGGGAG ACATCAAAGC CTGTTTCGAC AAGATTGGGC ATCAATGGCT TATGAACAAC ATTGCCGTGG ATAAACGCAT GTTGGAACAA TGGTTAAAGT CTGGTTTTAT GGACAAAGGG CTGTTCTATC GTACAGATGA GGGAACACCT CAAGGCGGGG TTATATCCCC CACCTTGATG CTAATGACCC TTGCAGGAAT TGAGCTGCGC ATAAAGTCTA CCGCTCTCAA AAAGGGGGCA AGAGCTAACT TTATTGGATA CGCCGACGAT TTCGTCGTCA CCTGTGCTTC AAAGGAAGTG CTGGAGAACG ATATCAAACC GTTGATTGCT GATTTCTTAG CAGAAAGAGG CTTAACACTC TCCGAAGAGA AAACGCACAT TACTCATATC AGTCGTGGTT TTGATTTCCT AGGTTTTAAC CATAGGAAGT ACAAAGGAAA ATTGCTCATT AAACCGAGTA AATCCAACAC ACTGTTGTTC TTGAGTAACT TGCGCGAACT CATCAAAAAG CACGCAACTA TCCCCGTCAA CGATTTAATC AAATTGATAA ATCCGAAACT ACGGGGCTGG TCGAATTACT ATCGACACTG CGTGGCCAAA CAGGTATTCG GATATGTAGG TCACAAGCTA TTCCATACGC TATGGCACTG GGCTAAAAGG CGTCATCCAA CCAAATCGAG AACTTGGATC GCTCTTAAGT ACTTCATCAA CCGTCAAGGC CAATGGCAAT TTCACGGTTG GCAGAAGATC ATGAATATGG ATTGTCAGTT CAATCTGTTT CAAATAGCCA AGGTGCCAAT AGAGAGACAT GTGAAAATCA GGAGTGCCGC AACGCCTTTT GACCCTCAAT ACCAAGAATA CTTGGCAAAG AGAAAGTCAA AAAGGCAATG TCGTAACTCT TGGCATGAGC CTGCTCTCGC TGCTTTATAA
|
Protein sequence | MISKEISASP DSAQWSSINW KAVESHVLKL QMRIAKATRE GKHGKAKALQ WILTHSRSAK LLAVKRVSQN KGSKTPGIDG VIWNTDTRRM KAVNQLSRKA YLAKPLKRIY IPKKNGKLRP LGIPCMVDRA QQALHLLALE PVSETLADPN SYGFRPNRST ADAIAQCFKC LALKKSAQWV LEGDIKACFD KIGHQWLMNN IAVDKRMLEQ WLKSGFMDKG LFYRTDEGTP QGGVISPTLM LMTLAGIELR IKSTALKKGA RANFIGYADD FVVTCASKEV LENDIKPLIA DFLAERGLTL SEEKTHITHI SRGFDFLGFN HRKYKGKLLI KPSKSNTLLF LSNLRELIKK HATIPVNDLI KLINPKLRGW SNYYRHCVAK QVFGYVGHKL FHTLWHWAKR RHPTKSRTWI ALKYFINRQG QWQFHGWQKI MNMDCQFNLF QIAKVPIERH VKIRSAATPF DPQYQEYLAK RKSKRQCRNS WHEPALAAL
|
| |