Gene VIBHAR_06770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06770 
Symbol 
ID5557491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1899159 
End bp1899851 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID640911238 
ProductRNA-directed DNA polymerase 
Protein accessionYP_001448880 
Protein GI156977974 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA TCTGCTCCTC AACCAACCTG AATCAAGCTT TACGAAGAGT GAAGAAGAAC 
AAGGGATGTG CAGGTGTCGA CAAACTCGAC ATAGATGCAA CTATCTTTAA GCTTCGACAA 
GCTTCAAACG GGCAAGCGCT TCGCCAGAGT CTTCTGGATG GAAGCTACCG ACCTCAACCC 
GTTCTTGGTG TGGGAATCCC CAAACCGAGT GGTGGCGTCA GACAACTAGG TATCCCAACA 
GTGCTCGATA GAATTGTCCA ACAGGCAATC ACGCGAGTGC GGCAGATAAC GAAGCGAAAC 
CGAGGTCGAG AGTTAAAGGT GGTAATCGCC GAGTTAACTC AATACCTAAG AGGTTGGCAA 
GACTACTTCA AACTCGCCAT ACGGAAGAGC AGCATGAAGC GCTTGGACGA ATGGATACGG 
CGACGGCTAA GATGCTATCG ACTTAAGCAA CGCAAACACA GATACGGCAT AGCGACATGG 
TTACAGCGAC AAGGTGTAAC AGAGCGTAAT GCGTGGAAGT TAGCGATGTC AGATAAAGGT 
TGGTGGCGGC TAGCATTAAC GCCCCAGACA AATCACGCTA TGCCAACAAA ATGGTTCGAG 
GAGTTGGGTC TGTACTCGTT GCGAGATGGG TATGAGTCAC TAAAAGTATA TTCGGAACCG 
CCGTATGCGA CCCACGCTTG TACGGTGGTG TGA
 
Protein sequence
MEQICSSTNL NQALRRVKKN KGCAGVDKLD IDATIFKLRQ ASNGQALRQS LLDGSYRPQP 
VLGVGIPKPS GGVRQLGIPT VLDRIVQQAI TRVRQITKRN RGRELKVVIA ELTQYLRGWQ 
DYFKLAIRKS SMKRLDEWIR RRLRCYRLKQ RKHRYGIATW LQRQGVTERN AWKLAMSDKG 
WWRLALTPQT NHAMPTKWFE ELGLYSLRDG YESLKVYSEP PYATHACTVV