Gene VIBHAR_06756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06756 
Symbol 
ID5558015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1887594 
End bp1888214 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content49% 
IMG OID640911224 
Producthypothetical protein 
Protein accessionYP_001448866 
Protein GI156977960 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGC TATTACTCGC GCTACCAGCA TCAGTTTTGA TCGCGGTGAG CTTGTTTAGC 
TTTATGGCGT GGATGGTCGA TAAGGGCAAT CAACGTGCAC CTAAGCCTTC GGAGGCGGTG 
CGCTTTGATA TGGTGATGGT AGAGAATGAT GCTGATGTTC AACGTCGTCA ACGCTCTGTA 
CCTGAGCAGC CTGTACCACC AAAATCGCCA GAGCCGATGG ATCTGTCTCA AGCGGAAACC 
CAAGTAGAGC CAATGAGCCA AGTAACGCCA ATCAGCGCAT TGGGTTTGAA TACTGCGCTG 
GATGGTCTCG CGATCAGTGC GCCGAACTTA AAAGGCACCA TGGGCAACCA ACAGGCGATA 
ATGCTTTACA GCCCAGAGCC TCGTTATCCA AGCAAAGCCC TAAAACGTAA AATGGAAGGT 
TACGTAGTGA TGCGCTTTAC CATTGATGCG ACAGGTCGCC CTAAAGACGT TGAAGTGATT 
GATGCTAAGC CTAAGAGAGT GTTCGAGAAA GATGCTATTC GTGCATTGAA GAAGTCGAAG 
TACCAACCTA AAGTCGAAAA CGGTGTCGCG GTGGAGCGCT TTGGGCAAAC CAGAAGAGTG 
GAGTTCAAGT TACCCAAATG A
 
Protein sequence
MKRLLLALPA SVLIAVSLFS FMAWMVDKGN QRAPKPSEAV RFDMVMVEND ADVQRRQRSV 
PEQPVPPKSP EPMDLSQAET QVEPMSQVTP ISALGLNTAL DGLAISAPNL KGTMGNQQAI 
MLYSPEPRYP SKALKRKMEG YVVMRFTIDA TGRPKDVEVI DAKPKRVFEK DAIRALKKSK 
YQPKVENGVA VERFGQTRRV EFKLPK