| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06716 |
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| Symbol | |
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| ID | 5558129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 1849000 |
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| End bp | 1851123 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640911184 |
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| Product | hypothetical protein |
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| Protein accession | YP_001448827 |
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| Protein GI | 156977921 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACT CAATAGAGAA GGAATTGCAG AAGTTTGAGC TGCCCACGCG CACAGACTTT
CCGTGGGTAA CGACCACAAT CACAGTGTTT GCCGTGGTGC TATCTGTTTT GCACATTTGG
TTTAATACTT TATCGACGTT ACCGGAGTTA TGGATTTCTG CCACTCACTT TGCTGGTTTT
GCAGTAATTT GTGCGCTTTG GTACCCGGCC CATATCTCTC TCAAGCAGAG TAAGATTGCA
CTGGGCGTCG ATGTGTTGAT TGCCATGGGG GCCGTCGCGT GCTTGCTCTA CATTCCTTAT
GCCGAAGACG CGCTGTACGA ACGCGGTGTG AAGTTCGTGA CCAGCGATTG GGTGTTCGCC
ATCTTGGCCA TCTTGATTGT TATCGAACTG ATTCGACGTA CTATGGGCTG GTTTATTCCA
GTGCTGATTG TGGTGTGTTT AAGCTACGTT GTGCTTTGGG GTAAGTGGGC AACCGGTATT
TTCCACTTCC CGGGTTTGAG TATGGAAACT TTACTTTACC GCAGTTTCTA TTCTTCAGAG
GGCATGTTCG GTTCTATTTC ACGCATCAGT TGGACTTTTG TATTCATGTT CATTCTGTTT
GGTGCGTTTC TTGTTCGCTC TGGCGTCGGC GATTACATCA TCAATGTGGC ACGTGCGGCG
GCTGGCAAAA TCATTGGCGG TCCCGGTTTT ATCGCGGTAA TTGGCTCTGG TTTGATGGGC
TCTGTATCGG GCTCTAGCGT AGCAAATACG GTTTCAACTG GTGTTATCAG TATTCCTTTG
ATGCAAAAAG CGGGGTTCCC TTCGCGCTTT GCTGCGGGCG TTGAAGCGGC GGCCTCGACA
GGTGGTCAGT TGATGCCACC AGTGATGGGG GCGGGTGCTT TCATCATGGC GTCTTACACG
CAAATTCCTT ATGTTGATAT CATCGCGGTT TCTTTCATTC CAGCTCTTAT CTACTTCTTG
TCTGTGGCGT TCTTTGTGCG TATCGAAGCT AAACGCAGCG GTGTTCAGAA GATCACGACC
AGTGATGAAT CTCTACTTAA AGTCGTGGTT AGCGGCTGGC ACAACCTTAT TCCGCTGGCT
GTGTTGGTTA CTCTTTTGGT CCAAGGCTTC ACACCAACTT ACGCTGCAGG TCTATCGATC
ATTTCTGTTG TGGTGGCTTC TTGGTTCTCA AAAGATCACA AAATGGGACC AAAAGCGATC
ATCGAAGCGC TTTCGCAAGG CGCGAAAAAC ATGGCGACAA CCGCCGTATT GCTTGTGGGT
ATTGGTTTGG TGGTCAACGT GATCAGCACC ACGGGCATCG GTAACACGTT CTCATTGATG
ATCGACGGCT GGGCGAATGG CGACTTGTTC ATTATGATCG TTCTTATTGC GCTCGCCTCT
CTGGTATTGG GCATGGGGTT ACCAGTAACG GCGGCTTACA TTGTTTTGGG TACACTGTCT
GCCCCTGCGC TGTACAAGTT GATTGCGGAA AACCAATTGC TTGAATTAAT GGTGTCGGGT
CAATTGCCAG AGCAAGCAAA AGCCATCTTT ATGTTGGCGG CGCCAGAAAA GCTGGAACTG
CTTAATGCGC CAATGGCGTT GGAAACTGCA AAAGAAATGG TGGCGTTAGT GCCCGCTGAC
TTTATGGAAA CCCTACTAGA GCAAAGTCTA GGTATGGAAG CGGTAGGCTT AGCACTGCTG
GCTGCTCACC TCATTATCTT TTGGTTATCG CAAGACAGCA ACGTAACCCC TCCAGTGTGT
TTGACCGCTT TTGCTGCGGC AACCATTGCA AAAACACCGC CAATGCGCAC CGGTTTAATG
GCGTGGAAAA TCGCCAAAGG TTTGTATCTT GTGCCGCTAC TTATTGCCTA CACAGGCTTG
GTAAGTTGGG ATGTGACGTC GGTGATTACC GTCGGCTTCT TTGCAATCAT TGGTACCTAT
GCATTGATTG GTGCGATTGA AGGTTACTTG GAAGGTCCTC TAAACATTCT GCTGCGTCTT
GTGTTGATTG TGGTGGGTAC ATTGCTGGTT TGGCACGACA TCCCAATGTT GGTTCGTGTA
GCAAGCTGCG CAGTATTTGT CGCGATTTTT ATTTACAGTG GTCGCAAGTT CAAATTGCAA
CAATCTCAAC TATCGGTTTT ATAA
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| Protein sequence | MSDSIEKELQ KFELPTRTDF PWVTTTITVF AVVLSVLHIW FNTLSTLPEL WISATHFAGF
AVICALWYPA HISLKQSKIA LGVDVLIAMG AVACLLYIPY AEDALYERGV KFVTSDWVFA
ILAILIVIEL IRRTMGWFIP VLIVVCLSYV VLWGKWATGI FHFPGLSMET LLYRSFYSSE
GMFGSISRIS WTFVFMFILF GAFLVRSGVG DYIINVARAA AGKIIGGPGF IAVIGSGLMG
SVSGSSVANT VSTGVISIPL MQKAGFPSRF AAGVEAAAST GGQLMPPVMG AGAFIMASYT
QIPYVDIIAV SFIPALIYFL SVAFFVRIEA KRSGVQKITT SDESLLKVVV SGWHNLIPLA
VLVTLLVQGF TPTYAAGLSI ISVVVASWFS KDHKMGPKAI IEALSQGAKN MATTAVLLVG
IGLVVNVIST TGIGNTFSLM IDGWANGDLF IMIVLIALAS LVLGMGLPVT AAYIVLGTLS
APALYKLIAE NQLLELMVSG QLPEQAKAIF MLAAPEKLEL LNAPMALETA KEMVALVPAD
FMETLLEQSL GMEAVGLALL AAHLIIFWLS QDSNVTPPVC LTAFAAATIA KTPPMRTGLM
AWKIAKGLYL VPLLIAYTGL VSWDVTSVIT VGFFAIIGTY ALIGAIEGYL EGPLNILLRL
VLIVVGTLLV WHDIPMLVRV ASCAVFVAIF IYSGRKFKLQ QSQLSVL
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