Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06667 |
Symbol | |
ID | 5556869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1803448 |
End bp | 1805598 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640911136 |
Product | hypothetical protein |
Protein accession | YP_001448781 |
Protein GI | 156977875 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACC ACACTATAAG TTCATCTGCA CCCACCGATG ATGAAATCGA TCTCGGTAAA CTGTTTGGCA TACTAATAGA TGCGAAATGG TTCATCGTTG GCATTACACT TCTCTTTGCA ACAATCGGTA TTGCCGTTGC GTTGCTATCG ACACCAATTT ACAAAGCTGA TGCCCTAATT CAGATCGAAC AGAAAAGCTC CGGCGGTATT TCGGCGATGG TCGGCGATAT GGGCGACCTT TTTGCTGCTG AGTCTTCAGC AACGACTGAA ATTGAGATCA TCAAGTCACG TATGATCCTC GGTGATACCG TCGATAAATT TAACCTAACA ACAATTGCCA CTCCGGAATA CTTTCCTTTT GTTGGCAAAG GTTTGGCTCG AATCAATGGC ACTCAAAATT ACATTTCAGT ATCAAGTTTC GAGATACCTC GCACCGCGCA AGGCTTCAGG CATCACCTTG TAGTGAGCGA TGCAGAGAAA GGTACTTTTG ATCTGATGAT TGAAGATAAA ATTGTGCTAT CTGGCGTTGT TGGTCAAACG ATCGAAATGA ATGGCTACCA CATCAAAGTA CGTGAACTGG TTGCGCAAAA TGAAGACAGT TTTTCTATCG GAAAAATTAG CAAGCTTGAT GCGATCAACC GATTAGCTTC ACAACTGTCT ATTTCAGAAC GTGGTGCGAA AACAGGTATT GTGTCACTGA GTATTGAAGG CGAATACCCT GAGCGTAACC AACAAATCTT GAATGATGTC GTACAAAACT ATTTCCTACA AAATGTGCGA AGAAATTCAG CAGAAGCAGA ACAAAGCTTA AACTTCCTGA AAGATCACCT GCCAGAAATT AAAGATAAGC TTAACGGCTC AGAGGACGTA TTGAATCGTT TTAGACAAGA AAACGAATCG ATCGACTTAA ACCTTGAAGC ACAATCAACA CTCAAAGTGA TGGTTGCTCT TGAAGCACAG CTAAATGAAC TGACCTTTAA AGAGAGTGAA ATCAGTCAGA AGTTCACTCA AGACCACCCA GCATACAAAT CACTATTGGA TAAACGTCAG ACACTACTGC AAGAAAAAGC TCGTTTAAAC CGACAAGTAC AGAAGTTGCC GAAGACACAA CGTGAAGTGT TGCGTATGAC ACGTGACGTT GAAGTGAACC AACAGATCTA CATCCAGCTT CTAAACAAAG TTCAAGAGTT GAACATTATT AAAGCAGGTA CCGTTGGTAA CGTACGTATT ATCGATAGTG CGCAGTCTTA CGCTATTCCA GTGAAGCCTA AAAAGCCTCT TATTGTTGTT CTAGCAACAC TATTAGGCGG AATGGTGGCC GTTGCTTTCG TTCTGGTCAA AACTGCTTTC CATCGCGGTG TCACATCCCC AGATGAGATT GAACAAACGG GGATTTCCGT TTACGCAAGT GTTCCTAAGT CTGTACAACA ACTGGAAGTC GCTAACAAGC TTAAGCGCAA GGGTAACAAG GACCTACTGT TATTAGCAGA AGAAAACCCA GCGGACCTTT CGATTGAATC ATTACGTGGA CTTCGTACCA GCCTTCATTT TGCGATGATG GAAGCGAAAA ACAACGTTCT AATGATCTCT GGACCTGCTC CCTCAATTGG TAAAACATTC GTTTCAACTA ACTTTGCAGC AGTTGCGGCG AAGACAGGCC AGAAGGTACT ATTGGTTGAC GCAGATATGC GTAAAGGTTA TCTGCAACAA TGTTTTGGCC TGGCGGCAGA TAACGGCCTT TCTGACTTTT TAAGCGGTAA GATTAGTCAA GATATGGTGA TCAAGCCGAC TAAAGTTGAG AACTTAGGTG TAATTACTCG TGGTCAAGTA CCACCAAACC CTTCTGAGCT TTTGATGCAC CCACGATTTG CTGAGTTTGT AAAAAAAGCA TCACAAGAGT ATGACCTAGT GATCATCGAT ACACCGCCAG TATTAGCAGT GACTGATCCT AGTATCGTTG GTGCGATTGC AGGTACCACT CTTATGGTTG CTCGATTTGA CCAAACGACA TCGAAAGAAC TAGAAGTCGC TCGTAGCCGA TTTGAACAAT CGGGTGTCGA AGTAAAAGGC GTCATTCTTA ATGCAATAGA GAAGAAAGCC GCAAGCTCAT ACGGTTATGG TTATTACAAC TACGCTTACA AAAGTGAATA A
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Protein sequence | MANHTISSSA PTDDEIDLGK LFGILIDAKW FIVGITLLFA TIGIAVALLS TPIYKADALI QIEQKSSGGI SAMVGDMGDL FAAESSATTE IEIIKSRMIL GDTVDKFNLT TIATPEYFPF VGKGLARING TQNYISVSSF EIPRTAQGFR HHLVVSDAEK GTFDLMIEDK IVLSGVVGQT IEMNGYHIKV RELVAQNEDS FSIGKISKLD AINRLASQLS ISERGAKTGI VSLSIEGEYP ERNQQILNDV VQNYFLQNVR RNSAEAEQSL NFLKDHLPEI KDKLNGSEDV LNRFRQENES IDLNLEAQST LKVMVALEAQ LNELTFKESE ISQKFTQDHP AYKSLLDKRQ TLLQEKARLN RQVQKLPKTQ REVLRMTRDV EVNQQIYIQL LNKVQELNII KAGTVGNVRI IDSAQSYAIP VKPKKPLIVV LATLLGGMVA VAFVLVKTAF HRGVTSPDEI EQTGISVYAS VPKSVQQLEV ANKLKRKGNK DLLLLAEENP ADLSIESLRG LRTSLHFAMM EAKNNVLMIS GPAPSIGKTF VSTNFAAVAA KTGQKVLLVD ADMRKGYLQQ CFGLAADNGL SDFLSGKISQ DMVIKPTKVE NLGVITRGQV PPNPSELLMH PRFAEFVKKA SQEYDLVIID TPPVLAVTDP SIVGAIAGTT LMVARFDQTT SKELEVARSR FEQSGVEVKG VILNAIEKKA ASSYGYGYYN YAYKSE
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