Gene VIBHAR_06667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06667 
Symbol 
ID5556869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1803448 
End bp1805598 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content43% 
IMG OID640911136 
Producthypothetical protein 
Protein accessionYP_001448781 
Protein GI156977875 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACC ACACTATAAG TTCATCTGCA CCCACCGATG ATGAAATCGA TCTCGGTAAA 
CTGTTTGGCA TACTAATAGA TGCGAAATGG TTCATCGTTG GCATTACACT TCTCTTTGCA
ACAATCGGTA TTGCCGTTGC GTTGCTATCG ACACCAATTT ACAAAGCTGA TGCCCTAATT
CAGATCGAAC AGAAAAGCTC CGGCGGTATT TCGGCGATGG TCGGCGATAT GGGCGACCTT
TTTGCTGCTG AGTCTTCAGC AACGACTGAA ATTGAGATCA TCAAGTCACG TATGATCCTC
GGTGATACCG TCGATAAATT TAACCTAACA ACAATTGCCA CTCCGGAATA CTTTCCTTTT
GTTGGCAAAG GTTTGGCTCG AATCAATGGC ACTCAAAATT ACATTTCAGT ATCAAGTTTC
GAGATACCTC GCACCGCGCA AGGCTTCAGG CATCACCTTG TAGTGAGCGA TGCAGAGAAA
GGTACTTTTG ATCTGATGAT TGAAGATAAA ATTGTGCTAT CTGGCGTTGT TGGTCAAACG
ATCGAAATGA ATGGCTACCA CATCAAAGTA CGTGAACTGG TTGCGCAAAA TGAAGACAGT
TTTTCTATCG GAAAAATTAG CAAGCTTGAT GCGATCAACC GATTAGCTTC ACAACTGTCT
ATTTCAGAAC GTGGTGCGAA AACAGGTATT GTGTCACTGA GTATTGAAGG CGAATACCCT
GAGCGTAACC AACAAATCTT GAATGATGTC GTACAAAACT ATTTCCTACA AAATGTGCGA
AGAAATTCAG CAGAAGCAGA ACAAAGCTTA AACTTCCTGA AAGATCACCT GCCAGAAATT
AAAGATAAGC TTAACGGCTC AGAGGACGTA TTGAATCGTT TTAGACAAGA AAACGAATCG
ATCGACTTAA ACCTTGAAGC ACAATCAACA CTCAAAGTGA TGGTTGCTCT TGAAGCACAG
CTAAATGAAC TGACCTTTAA AGAGAGTGAA ATCAGTCAGA AGTTCACTCA AGACCACCCA
GCATACAAAT CACTATTGGA TAAACGTCAG ACACTACTGC AAGAAAAAGC TCGTTTAAAC
CGACAAGTAC AGAAGTTGCC GAAGACACAA CGTGAAGTGT TGCGTATGAC ACGTGACGTT
GAAGTGAACC AACAGATCTA CATCCAGCTT CTAAACAAAG TTCAAGAGTT GAACATTATT
AAAGCAGGTA CCGTTGGTAA CGTACGTATT ATCGATAGTG CGCAGTCTTA CGCTATTCCA
GTGAAGCCTA AAAAGCCTCT TATTGTTGTT CTAGCAACAC TATTAGGCGG AATGGTGGCC
GTTGCTTTCG TTCTGGTCAA AACTGCTTTC CATCGCGGTG TCACATCCCC AGATGAGATT
GAACAAACGG GGATTTCCGT TTACGCAAGT GTTCCTAAGT CTGTACAACA ACTGGAAGTC
GCTAACAAGC TTAAGCGCAA GGGTAACAAG GACCTACTGT TATTAGCAGA AGAAAACCCA
GCGGACCTTT CGATTGAATC ATTACGTGGA CTTCGTACCA GCCTTCATTT TGCGATGATG
GAAGCGAAAA ACAACGTTCT AATGATCTCT GGACCTGCTC CCTCAATTGG TAAAACATTC
GTTTCAACTA ACTTTGCAGC AGTTGCGGCG AAGACAGGCC AGAAGGTACT ATTGGTTGAC
GCAGATATGC GTAAAGGTTA TCTGCAACAA TGTTTTGGCC TGGCGGCAGA TAACGGCCTT
TCTGACTTTT TAAGCGGTAA GATTAGTCAA GATATGGTGA TCAAGCCGAC TAAAGTTGAG
AACTTAGGTG TAATTACTCG TGGTCAAGTA CCACCAAACC CTTCTGAGCT TTTGATGCAC
CCACGATTTG CTGAGTTTGT AAAAAAAGCA TCACAAGAGT ATGACCTAGT GATCATCGAT
ACACCGCCAG TATTAGCAGT GACTGATCCT AGTATCGTTG GTGCGATTGC AGGTACCACT
CTTATGGTTG CTCGATTTGA CCAAACGACA TCGAAAGAAC TAGAAGTCGC TCGTAGCCGA
TTTGAACAAT CGGGTGTCGA AGTAAAAGGC GTCATTCTTA ATGCAATAGA GAAGAAAGCC
GCAAGCTCAT ACGGTTATGG TTATTACAAC TACGCTTACA AAAGTGAATA A
 
Protein sequence
MANHTISSSA PTDDEIDLGK LFGILIDAKW FIVGITLLFA TIGIAVALLS TPIYKADALI 
QIEQKSSGGI SAMVGDMGDL FAAESSATTE IEIIKSRMIL GDTVDKFNLT TIATPEYFPF
VGKGLARING TQNYISVSSF EIPRTAQGFR HHLVVSDAEK GTFDLMIEDK IVLSGVVGQT
IEMNGYHIKV RELVAQNEDS FSIGKISKLD AINRLASQLS ISERGAKTGI VSLSIEGEYP
ERNQQILNDV VQNYFLQNVR RNSAEAEQSL NFLKDHLPEI KDKLNGSEDV LNRFRQENES
IDLNLEAQST LKVMVALEAQ LNELTFKESE ISQKFTQDHP AYKSLLDKRQ TLLQEKARLN
RQVQKLPKTQ REVLRMTRDV EVNQQIYIQL LNKVQELNII KAGTVGNVRI IDSAQSYAIP
VKPKKPLIVV LATLLGGMVA VAFVLVKTAF HRGVTSPDEI EQTGISVYAS VPKSVQQLEV
ANKLKRKGNK DLLLLAEENP ADLSIESLRG LRTSLHFAMM EAKNNVLMIS GPAPSIGKTF
VSTNFAAVAA KTGQKVLLVD ADMRKGYLQQ CFGLAADNGL SDFLSGKISQ DMVIKPTKVE
NLGVITRGQV PPNPSELLMH PRFAEFVKKA SQEYDLVIID TPPVLAVTDP SIVGAIAGTT
LMVARFDQTT SKELEVARSR FEQSGVEVKG VILNAIEKKA ASSYGYGYYN YAYKSE