Gene VIBHAR_06653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06653 
Symbol 
ID5557509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1790688 
End bp1791854 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content49% 
IMG OID640911123 
ProductD-alanyl-D-alanine carboxypeptidase 
Protein accessionYP_001448768 
Protein GI156977862 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGT CACTAACCCG AATCACGCTC GCTTGTTTAT TACTACAGAC CATCAGTGCC 
CCTGCATTGG CAGTCGTAAC GCCGAATCCG CCTCAGTTGC AGGCAAAAGG CTATGTGTTA
ATGGACTTTC AGTCCGGTGC CATCATAGCG GAGCAAAACG CGCGTGCCGG ATTAGCCCCT
GCCAGTTTAA CTAAGTTGAT GACCGCTTAC GTCGTGGGGC AAGAAATCAA ATCTGGGCGG
CTCCAATGGG ACGATAAAGT GACGGTGAGT GAGAATGCAT GGTCAGCTAA ATTTCCAGAC
TCCTCCAAAA TGTTTATCCA ACCCAAAGAT GAAATCACCG TCGCCAACCT AATGCGTGGT
GTGATCATTC AATCTGGTAA TGATGCTTGT GTGGCGCTCG CCGAACATGT TGCCGGTGGT
GAAGGGGCGT TTGTTGCGTT GATGAATGGT TGGGCAGATA AACTCAGCTT GAACGATACC
TACTTCGTTA ACTCGCATGG TCTGGATAGC GAGGGCATTC AAACTTCTCC TAATGACATG
GCGACGCTGA TGCAATCCAT CATCAATGAC GTGCCTGAAG TCTATGCGCT CTATAGTGAG
AAGGTATTCA AGTGGAACAA GATCACCCAA TACAACCGCA ATAAGTTGCT ATGGGACAAA
TCGATGGATG TCGATGGAGG TAAAACGGGC TACACCAGCA ATGCGGGGTA CAGTTTGGTG
AGCTCTGCTA AACAAGGAAA GATGCGATTG ATCTCGGTAG TGATGGGGAC GCCAAGTAAA
CAATCGCGAA TCACCCAGTC TAAGAACTTA CTCAGTTACG GCTTCCGTTT TTATGACACC
AAACAAGTGG CAAAACAGGG AGAGGTGCAG GCGAGTGCAA AAGTATGGAA AGGCAATGTC
AGTGAGATTG ATTTGGGCTT CGCTCAAGAT GCGTACCTGA CGCTGCCTCG TTCCCTAACC
GCTGGTTTAG ACAAGAGCGT GGTCGTGAAT GAACCGTTGA TAGCACCCAT CGCGAAAGGC
GATGTGGTTG GTAAAGTCGT GTGGAAGAGT GACGATCAAA CAGTAGCAAG CTATCCATTG
GTAAGTAACC AAGCGGTGGA AGAGGGCTCA TGGATTGGTA AGTTATGGGA CAGTTTGGTG
CTGTGGGTGA AATCGTTGTT TAATTAG
 
Protein sequence
MNTSLTRITL ACLLLQTISA PALAVVTPNP PQLQAKGYVL MDFQSGAIIA EQNARAGLAP 
ASLTKLMTAY VVGQEIKSGR LQWDDKVTVS ENAWSAKFPD SSKMFIQPKD EITVANLMRG
VIIQSGNDAC VALAEHVAGG EGAFVALMNG WADKLSLNDT YFVNSHGLDS EGIQTSPNDM
ATLMQSIIND VPEVYALYSE KVFKWNKITQ YNRNKLLWDK SMDVDGGKTG YTSNAGYSLV
SSAKQGKMRL ISVVMGTPSK QSRITQSKNL LSYGFRFYDT KQVAKQGEVQ ASAKVWKGNV
SEIDLGFAQD AYLTLPRSLT AGLDKSVVVN EPLIAPIAKG DVVGKVVWKS DDQTVASYPL
VSNQAVEEGS WIGKLWDSLV LWVKSLFN