Gene VIBHAR_06645 details

Gene Information

• Locus tag: VIBHAR_06645
• ID: 5557631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1784956
• End bp: 1785675
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640911115
• Product: hypothetical protein
• Protein accession: YP_001448760
• Protein GI: 156977854
• COG category: [S] Function unknown
• COG ID: [COG3110] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGATG CACTCTCGAT GACCACTAAT ACAGTGCTTA GGATAAAAAC AATGAAATTG 
ATCAAGCCTT TAACTTGCGC GCTTGCTCTG GCAATGAGTG GCATGGCTTT CGCGGATGTG 
ACAGTAACCG TTCCTGACGA CGTTTCTATT TTGGCGGCTA ACGGCGAGAA AGTGAAATTA 
TCGGGTGGCT TCTTTGCTTC TGAACGTTCA CTAACTCTAC CAGATGGCAT TAACCAAGTT 
GTATTCCGTT ACTCACCATA CTTCAGCCAA GGCAATGATC GCCTAAGCGT GGAAAGTGAC 
GTTATCGTAA CTCGTTTCGA CGCAGCGGAC GCAGAACTAA GCCTACAAGT TCCTGAATAC 
CGTGACCTTC GCCAAGCGGA AGACAAAATC AAAGACCTAG ATTGGAAACT GATTGATGCT 
TCTGGCAACG CAATTGCGGT AGAGCAAGAC AAGCTAATCA AACCTGGCAT GCAAATCGGT 
CGTGATTACG TGCGCGAAGT GGAAGATTAC AACAAGACTG GTGGCGTAGC GGCAATCGGT 
GTTGCAACAG CAGCGGTTCA ACCTGTAACA CTTCCTGCAA AAATTCCAGC AGACATGAAG 
CAAACTAAGC CTGCGACAAT GAAAGCAGAT TCTACGGCTG AAGAAATGCT GCATTTCTGG 
TACCAAAAAG CGGACGCTGA GACACAAGCG CGCTTTAAAG ACTACATCAA CCAGCAATAA 

 

Protein sequence

MNDALSMTTN TVLRIKTMKL IKPLTCALAL AMSGMAFADV TVTVPDDVSI LAANGEKVKL 
SGGFFASERS LTLPDGINQV VFRYSPYFSQ GNDRLSVESD VIVTRFDAAD AELSLQVPEY 
RDLRQAEDKI KDLDWKLIDA SGNAIAVEQD KLIKPGMQIG RDYVREVEDY NKTGGVAAIG 
VATAAVQPVT LPAKIPADMK QTKPATMKAD STAEEMLHFW YQKADAETQA RFKDYINQQ