Gene VIBHAR_06605 details

Gene Information

• Locus tag: VIBHAR_06605
• ID: 5558898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1755302
• End bp: 1755913
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640911078
• Product: putative threonine efflux protein
• Protein accession: YP_001448723
• Protein GI: 156977817
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCTTT TCAGCCTTGC CTTATTGGGC ATACTCATTG TCATCAGTCC CGGAGCCGAT 
TTTGTATTGG TTCTTAGAAA CAGCCTCAAC AGGGGCAGAC AAGCGGGAAT TTGGAGTGCC 
GTGGGCATTA GTCTTGCGAT TTCGGTGCAC ATTACCTATT CATTGCTTGG CATCAGTTAC 
TTAATTTCAC AGAACGAATG GTTGTTCAGC TTGATTCGCT ACCTAGGTGC GGCTTATCTG 
ATCTATCTCG GATTGAAAGG GATTTTTGGG GCCGATTCTC AACAGAAAAT AGAGGGGGAA 
ACACAAGAAA GCATCTCCAT TTGGCAGTTC TTTTTCCAAG GCTTTTTGTG CAATGTACTT 
AACCCAAAAA CCATGTTGTT CTTCTTGAGT ATCTTTAGCC AAGTCATCGA TCCGAATACA 
GAATCGCAGC ACCTAGCTTT GGGTTACGGT GTCTACATGA TTGCGCTACA CGGGATTTGG 
TTTTCTATGG TTGCCATCTT GTTTACCTCA CCGCGATTAC AGAGCTTATT ACTGCGCGTG 
AAACATAGGT TGAACCAAGC TTGTGGCGCT GGATTATTGG TGTTTGGTGC CATGTTGGGA 
TTGAAGTCAT AA 

 

Protein sequence

MELFSLALLG ILIVISPGAD FVLVLRNSLN RGRQAGIWSA VGISLAISVH ITYSLLGISY 
LISQNEWLFS LIRYLGAAYL IYLGLKGIFG ADSQQKIEGE TQESISIWQF FFQGFLCNVL 
NPKTMLFFLS IFSQVIDPNT ESQHLALGYG VYMIALHGIW FSMVAILFTS PRLQSLLLRV 
KHRLNQACGA GLLVFGAMLG LKS