Gene VIBHAR_06571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06571 
Symbol 
ID5558486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1720799 
End bp1721317 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content48% 
IMG OID640911044 
Producthypothetical protein 
Protein accessionYP_001448689 
Protein GI156977783 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGA AATCTATCGC AATCGCTGCA GCCGTTGTTA CTGTACTAGC AGGCTGTAAA 
GATAAGACGC CACCGGCACC AACAGAAGCG AACATTACGC TTGTTGAAGC GGTAACTGAA 
ACAGTGAAGA ACCCACACCA AGTGTGTAAA GACGTGGTTG TGACTCACCA AGTTGCACCA 
AAGGATAACA ACAAGATCCT TGGCACGGTC GGTGGTGCAG CAGCAGGTGC TGCGTTAGGT 
AACCAAATTG GTGGCGGTTC AGGTAAAGTG ATTGCAACGG CGGCAGGTAC TATCGCGGGT 
GCAATGGCGG GTCGCGAAAT CCAAGACAAT GTTCAGAAGG GTGATGTTGT AACATCAACT 
GAGAAGCAAT GTCATACAGA GTACACGACT TCTGAAAAAG TAGTCGGTTA CGATGTCACT 
TACGAGGTTG CTGGTGCGCC AACCACGGTT CGTATGAAGA GCAAGCCTGC AGGCAAGACA 
TTCCAAATTC AAGATGGCAA AGTGGTTCTA CCGCAATAA
 
Protein sequence
MNMKSIAIAA AVVTVLAGCK DKTPPAPTEA NITLVEAVTE TVKNPHQVCK DVVVTHQVAP 
KDNNKILGTV GGAAAGAALG NQIGGGSGKV IATAAGTIAG AMAGREIQDN VQKGDVVTST 
EKQCHTEYTT SEKVVGYDVT YEVAGAPTTV RMKSKPAGKT FQIQDGKVVL PQ