Gene VIBHAR_06538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06538 
Symbol 
ID5557572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1691538 
End bp1692197 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID640911011 
Producthypothetical protein 
Protein accessionYP_001448656 
Protein GI156977750 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGC CCTTGTATGT TTTTGATCTG GATGAAACCT TAATCAACGC TGACTGCGCA 
ATGATTTGGA ATGAATTTAT GGTCGAGAAA GGCATCGCCA CTGCGCCTAA CTTTATTGAG
GAAGATAAGC GTCTAATGGG CTTGTACGCA GAAGGCAAAA TGAACATGGA AGATTACCTA
ACGTTCTCCA TGAAACCGCT AGAAAACATG CCTATTGAAC AGGTCAACGC CTTGGTCGAG
GGGTGCGTTG AAAACCATAT TCTGGTTAAA CTCTTCCCGC AAGCCAAAAC CCTGATTGAA
CAGCTGCTTC GTGATGAGAT TGATATGGTC ATCATCTCTG CCAGCGTCAC TTTTTTGGTT
GAAGCGGTTG GTCGACGCAT CGGTATTCCT AACGCGCTCG GGATCGACTT AGTGGTGACT
GATAACCGAT ATAGCGCAGA AATCGACGGA ATCCCTAGTT ACCGAGAAGG CAAAGTAACG
CGCTTAAAAC AGTGGTTAGA AACTCAGCCT GACAACTACT CAGAAATCCA TTTCTACACG
GATTCGATTA ACGACTTACC ACTGTGTGAA TACGCGAATT ACGCTTATCT GGTCAATCCA
TGTCCTCGCC TAAAAGAGCA CACCGATAGA CCAAATTGGA CTGTGTTAAG TTGGGGGTAA
 
Protein sequence
MSKPLYVFDL DETLINADCA MIWNEFMVEK GIATAPNFIE EDKRLMGLYA EGKMNMEDYL 
TFSMKPLENM PIEQVNALVE GCVENHILVK LFPQAKTLIE QLLRDEIDMV IISASVTFLV
EAVGRRIGIP NALGIDLVVT DNRYSAEIDG IPSYREGKVT RLKQWLETQP DNYSEIHFYT
DSINDLPLCE YANYAYLVNP CPRLKEHTDR PNWTVLSWG