Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06538 |
Symbol | |
ID | 5557572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1691538 |
End bp | 1692197 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640911011 |
Product | hypothetical protein |
Protein accession | YP_001448656 |
Protein GI | 156977750 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAGC CCTTGTATGT TTTTGATCTG GATGAAACCT TAATCAACGC TGACTGCGCA ATGATTTGGA ATGAATTTAT GGTCGAGAAA GGCATCGCCA CTGCGCCTAA CTTTATTGAG GAAGATAAGC GTCTAATGGG CTTGTACGCA GAAGGCAAAA TGAACATGGA AGATTACCTA ACGTTCTCCA TGAAACCGCT AGAAAACATG CCTATTGAAC AGGTCAACGC CTTGGTCGAG GGGTGCGTTG AAAACCATAT TCTGGTTAAA CTCTTCCCGC AAGCCAAAAC CCTGATTGAA CAGCTGCTTC GTGATGAGAT TGATATGGTC ATCATCTCTG CCAGCGTCAC TTTTTTGGTT GAAGCGGTTG GTCGACGCAT CGGTATTCCT AACGCGCTCG GGATCGACTT AGTGGTGACT GATAACCGAT ATAGCGCAGA AATCGACGGA ATCCCTAGTT ACCGAGAAGG CAAAGTAACG CGCTTAAAAC AGTGGTTAGA AACTCAGCCT GACAACTACT CAGAAATCCA TTTCTACACG GATTCGATTA ACGACTTACC ACTGTGTGAA TACGCGAATT ACGCTTATCT GGTCAATCCA TGTCCTCGCC TAAAAGAGCA CACCGATAGA CCAAATTGGA CTGTGTTAAG TTGGGGGTAA
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Protein sequence | MSKPLYVFDL DETLINADCA MIWNEFMVEK GIATAPNFIE EDKRLMGLYA EGKMNMEDYL TFSMKPLENM PIEQVNALVE GCVENHILVK LFPQAKTLIE QLLRDEIDMV IISASVTFLV EAVGRRIGIP NALGIDLVVT DNRYSAEIDG IPSYREGKVT RLKQWLETQP DNYSEIHFYT DSINDLPLCE YANYAYLVNP CPRLKEHTDR PNWTVLSWG
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