Gene VIBHAR_06520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06520 
Symbol 
ID5557131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1676850 
End bp1678106 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content48% 
IMG OID640910993 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001448638 
Protein GI156977732 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGA TTGAAGATTT ACAAGCTCGC GGTTTAGTTG CCCAAGCGAG CGATTTAGAC 
CAAGTTCAAC AACTGCTATC TGAGCCACAA ACCTTGTACT GCGGTTTCGA TCCAACCGCA
GGTAGCCTGC ACATTGGCCA CCTTGTGCCA CTGATTATGC TCAAACGTTT TCAAGATGCA
GGACACCAAG CCATCGCCCT AATTGGCGGT GCGACCGGTA TGATTGGTGA CCCGAGCTTT
AAAGCCACAG AGCGAAGCTT AAACTCAGAA GAAACCGTAA CGGGCTGGGT ACAAGATCTG
TCGAATCAAA TTCAACAGTT GATGAATAAC CAAGTCAGCA AACCAATGAT CATGGTAAAC
AACGCGGATT GGGTGAAGCA GATTAACGTG ATCGACTTCT TCCGCGACGT AGGTAAGCAT
TTCTCCGTGA ATACCATGAT CAGCCGAGAG TCGGTGAAGC AACGCTTACA ACGTCCAGAT
CAAGGCATCT CATTTACAGA GTTTAGTTAC GCGCTACTGC AATCTTACGA CTTCGCAGAA
TTAAACCGTC AGTACGGCTG CCGCCTACAA ATCGGTGGCA ATGACCAATG GGGCAACAGT
GTTAGCGGCA TTGACCTTAC TCGCCGTCAG AATGGTGAGC AGGTCTTCGG TCTAACCCTA
CCTTTGATCA CCAAATCTGA CGGCACTAAG TTTGGTAAAA CCGAAGGTGG CGCTGTGTGG
TTAGATCCAA GTAAGACCTC GCCTTACGCC TTCTACCAAT TCTGGTTATC CGCGGAAGAT
GCCGATGTCT ATCACTTCCT GCGCTACTAC ACCTTCTTGA GTTGCGATGA GATTGCCGCG
ATTGAAGCAC AAGACAAAGA AAGCAAAGGC AAACCGCAAG CACAGCGTAT CTTAGCAGAA
CAAATGACGC GTTTTGTCCA CGGTGAAGAG GGCTTAGCAA GTGCAGAGCG AATCACTCAA
GCGCTATTTA GCGGCAATGT GCAGCAACTC AGTTTGAGCG AGCTAAAACA GTTAGAACTC
GATGGCTTGC CAAGCATGCA AAGTGCTGAG CAAGACTTGG TAGAACTACT GGTTGAATCG
GGCTTAGCCA ACTCAAAGCG CATTGCTCGT GAGCTGATTG GCAACAACGC CATCAGTGTG
AGCGGAGAGA AAGTGGATGC ACAAACCCCA AGTTTGAACT TCCCGTTGTT CGATCAATAC
TGGTTGCTTC AACGCGGTAA AAAGCATTTC TACTTGGTGA AACGCATCGC GGGTTAA
 
Protein sequence
MTLIEDLQAR GLVAQASDLD QVQQLLSEPQ TLYCGFDPTA GSLHIGHLVP LIMLKRFQDA 
GHQAIALIGG ATGMIGDPSF KATERSLNSE ETVTGWVQDL SNQIQQLMNN QVSKPMIMVN
NADWVKQINV IDFFRDVGKH FSVNTMISRE SVKQRLQRPD QGISFTEFSY ALLQSYDFAE
LNRQYGCRLQ IGGNDQWGNS VSGIDLTRRQ NGEQVFGLTL PLITKSDGTK FGKTEGGAVW
LDPSKTSPYA FYQFWLSAED ADVYHFLRYY TFLSCDEIAA IEAQDKESKG KPQAQRILAE
QMTRFVHGEE GLASAERITQ ALFSGNVQQL SLSELKQLEL DGLPSMQSAE QDLVELLVES
GLANSKRIAR ELIGNNAISV SGEKVDAQTP SLNFPLFDQY WLLQRGKKHF YLVKRIAG