Gene VIBHAR_06508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06508 
Symbol 
ID5556645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1662716 
End bp1663705 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content47% 
IMG OID640910981 
Producthypothetical protein 
Protein accessionYP_001448626 
Protein GI156977720 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTTAG AAGCCTTTGA TTTGGGTAAT ATCCTTAAAA TTGAACCACA ATGTAAAGTG 
AAATCAGCAT CGCGACAGGA GGAAAACATG CGATGGCGCA ATAGTAAAAG AAGCTCAAAC
GTAGAAGACC GTCGAGGACA ATCAGGGGCA AGAAGCTCTG CCTCAACAGG CTTACTCGTT
GCGCAATTGT TCCGTTTTCT GCCTTTCCTC TTAAAAAGCA AGGTAGGGCG AGTGGTGTTA
CTTGGTGGTG TTCTGTTCTT TGGGTATCAA GCTCTTATGG GAGATGGTGA TATGATGGGA
CAAATTGCAG GCACGCCAGC GGTAACGCAA CAGTCAAACA ACTCAGCTGA TAGCCAAGCG
TTAACGGATG AGAATGCCCA ATTTGTTGCG GCTATACTAG GAACGACCGA AACGGTTTGG
GGTGAACTGC TGCCTAATGG TTATTCAGAG CCGACTTTAG TGTTGTACAG TGGTTCTACA
ATGACAGGGT GCGGCGTGGG CAGGGCGGTG ACTGGGCCGT TTTATTGTCC AGCAGATCGG
AAAATATATC TAGATTTGAG CTTTATGGAT GAGCTTAAAA GACTCGGAGC CCCGGGAGAC
TTTGCCTTCG CTTACGTAAT TGCTCATGAA GTTGGCCACC ACGTACAAAC ACTGCTTGGC
ACCAGCAATC AAGTTCGCCA ATTGCAACAG CAATCCTCTA GAGTTGAAGC GAATGAATTG
AGTGTCAAAC TTGAACTGCA AGCTGACTGC TACGCTGGCG TATGGGGATT CTACGTCAAT
AATGAGATGA AACTGCTTGA GCCTGGAGAT ATGGAAGAGG GGATTGCTGC GGCAAGTGCT
GTGGGCGATG ACCGATTACA ATCTATGGCA GGGCAAAGTG TACAGCCCGA TAGTTTTACT
CATGGATCTT CAGAGCAGCG GGTCGAGTGG TTTCAAAAAG GCTTTCAATC GGGTGATCCA
AACCAATGCC AAACATTCGA AACTAACTGA
 
Protein sequence
MILEAFDLGN ILKIEPQCKV KSASRQEENM RWRNSKRSSN VEDRRGQSGA RSSASTGLLV 
AQLFRFLPFL LKSKVGRVVL LGGVLFFGYQ ALMGDGDMMG QIAGTPAVTQ QSNNSADSQA
LTDENAQFVA AILGTTETVW GELLPNGYSE PTLVLYSGST MTGCGVGRAV TGPFYCPADR
KIYLDLSFMD ELKRLGAPGD FAFAYVIAHE VGHHVQTLLG TSNQVRQLQQ QSSRVEANEL
SVKLELQADC YAGVWGFYVN NEMKLLEPGD MEEGIAAASA VGDDRLQSMA GQSVQPDSFT
HGSSEQRVEW FQKGFQSGDP NQCQTFETN