Gene VIBHAR_06481 details

Gene Information

• Locus tag: VIBHAR_06481
• ID: 5556891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1636171
• End bp: 1636863
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640910954
• Product: hypothetical protein
• Protein accession: YP_001448599
• Protein GI: 156977693
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3121] P pilus assembly protein, chaperone PapD

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCACC TAATTCTACT GCTGACAACA GTGATCATCT CGCTACCTAT TCATGCGCAA 
CTGTTGATTG CTCCGACCCG CTTGGTGCTG AATGCAGATC AGTCAGTGAC CGAGAAGATT 
ATCGTTGAAA ACAGCTCGGA CAAACCCATT CGACTTGAAA TCAAACCGGT TTATCGCCCT 
ATCACTTTGA GAGGCGTCAC CCGCTCCGAT AAAAACATCG CGCAAACGGA AGATATTGCG 
GAGTGGATTA AAGTATCTCC ACCTGTCATT CGTGAATTAA AACCAAATCA ACGACGCACC 
ATTCGCTTAA GATTTAGCGC CTTACCAGCA GATAAAGACA ATGGTGAATA TAGAGCGTAT 
TTGTGGTTTT CTCCGATCAC GTTGGCCCAA GGCCAAACCA CAGACTCCCA AAGCACGGGC 
CCCTCTTTTA ATCTCGACTT CAGAGTGAAC AGCTATATCC CTGTATATGC ACAACGCGGC 
GAGATAAAAC AAGATGTATC CTTCCAGTGC GAAAGCGGCG AGTTACGTAT TCAAAATAAA 
GGTAAATATC AGTTTAACGC TATGCTAAAC ACTAAAAAAC TTCAAGAAAA GTTGGTATTA 
CTTAGACAAT CAGAGCTTGT GAGATCGCTA CCCGCTAAGA CTCAAGTTCA GATCACACAA 
GACGAACAAT CACTACACGA ATGTACCTTG TAA 

 

Protein sequence

MKHLILLLTT VIISLPIHAQ LLIAPTRLVL NADQSVTEKI IVENSSDKPI RLEIKPVYRP 
ITLRGVTRSD KNIAQTEDIA EWIKVSPPVI RELKPNQRRT IRLRFSALPA DKDNGEYRAY 
LWFSPITLAQ GQTTDSQSTG PSFNLDFRVN SYIPVYAQRG EIKQDVSFQC ESGELRIQNK 
GKYQFNAMLN TKKLQEKLVL LRQSELVRSL PAKTQVQITQ DEQSLHECTL