Gene VIBHAR_06478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06478 
Symbol 
ID5557014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1634018 
End bp1634728 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content45% 
IMG OID640910951 
Producthypothetical protein 
Protein accessionYP_001448596 
Protein GI156977690 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTTCCA AAAATAAACT GATCCGTTAT CAATCCATTG AAGTCGAGGA TGTCTTCAGC 
AAGGAAGATA AGTTGATCAA ACTCGTACAA ACAGATCAAC TCTCTCAGGT GCTATTGTTA 
TGGCAGGTGA AAAGCCCAAC ACTGGTTCTT CCAGCAGGAA AGAAGTGGCC TATTTCGGAC 
GAGCTTGAAC AAGGCCTTGA AGACACAAAC TGGAAGCTCT TCTCAAGAAA AACAGGGGGC 
GCACCAGTCC CGCAAGTCCC AGGGATCATT AATCTCTCAC ATATTTACCA TTGGCCAGAA 
GATCAGCCAT ACGACATTAA GAAAGCATAC CTTGATTTGT GTTCAGTGCT CACCGTCTTC 
TTTAAGCAGC TTGGTGTAAA TGTCGACGTA CACGCAACGC CAAATTCCTA CTGTGATGGC 
GACTACAACC TAAACATCGA TGGACAAAAA GTAGTGGGGA CAGCACAGCG CGTATTACTG 
AAGAAAGGCG GCGGACAAGT TGTGCTTTCT CAAGCCTGTA TCCTTATTGA AACCGATGTC 
GAGAAAATCG TTGAACCGGT AAAACTGTGT AATCAATTGT GTGACCATTC CGATCATATT 
CGCGGCGATG TCCACACGCC CCTATTTAAC CACATTGAAC AAAGACCGAG CGTGGATGCC 
TTGTTCCAAC TCATCACACA AGCTTTCTTA GACCATGCTA AGCAAGGCTG A
 
Protein sequence
MASKNKLIRY QSIEVEDVFS KEDKLIKLVQ TDQLSQVLLL WQVKSPTLVL PAGKKWPISD 
ELEQGLEDTN WKLFSRKTGG APVPQVPGII NLSHIYHWPE DQPYDIKKAY LDLCSVLTVF 
FKQLGVNVDV HATPNSYCDG DYNLNIDGQK VVGTAQRVLL KKGGGQVVLS QACILIETDV 
EKIVEPVKLC NQLCDHSDHI RGDVHTPLFN HIEQRPSVDA LFQLITQAFL DHAKQG