Gene VIBHAR_06472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06472 
Symbol 
ID5556853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1628792 
End bp1629940 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content48% 
IMG OID640910945 
Productaminotransferase 
Protein accessionYP_001448590 
Protein GI156977684 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCG CACAGTCACT ACAACATGTA AAGTCATCGT ACATTCGAGA GATCCTCGCT 
GCCGCTAGCG ATAAAAACGT CATCTCGCTT GCTGGCGGTT TGCCCGATGA AAAGACCTTC 
CCTATCGACT TAATGAAGCC GACGCTAGAA AACTTGGCAA ACATGCCTGA AGTTTTCCAA 
TACGGCTCAA CAGCAGGCTA CGCGCCACTG CTAGAGTTCC TAAACGGCTA CTTCAAACTG 
CCTGAAACAC ACGCCGCAAT GATTACTACA GGCTCTCAGC AAGGCCTAGA TCTGATTGCA 
CGTGCTTATG TAAACCCAGG TGATAAAGTC GTGATGGAGG CACCAAGCTA CCTTGGTGCA 
ATGCAGGTGT TTGGTTTGGT TCAGGCGGAC ATCGTGACTG TCTCTCAAAC AGAATTTGGT 
CCAAACCTTG AAGAGCTAGA GCAATGCTTT GCAGAACAAA AACCGAAGAT GTTCTACGCT 
GTACCCGATT TCCATAACCC AACAGGGGTG TGCTGGGCAC TAGAAACGCG TCAAAAAGTT 
GCAGAGCTTT GTATTCAATA CAACGTCGCT TTTATTGAAG ACGCGCCTTA CCGTGAGTTG 
CGTTTCTCTG GTGAAGCACT GCCGCTTGTC TCTGATTTCT GTCCTCAGCA TTCTATCGTG 
CTGCGTTCAT TCTCTAAGAT CGCTTCTCCG GGTCTTCGCA TTGGTGTGGT GACGGGTAAA 
AGCAGTTATC TAGAACCGCT GATTAAAATC AAACAGGGTG CGGATCTGCA TTCCAGCGTA 
CCAATGCAAG CACTGTTGCA CGGTCTGCTT CAACACGATA ACTTTGAAAC CCACATCAGC 
ACCATTTGTG AGCTCTACAA GTCGCGTTAC GATGTCATGT ACGCAGAGCT AGAAAAGCAG 
CTTCCTAGCA ATTGTGTATT GAAGCCCGTT GACGGTGGCA TGTTTGTATG GGTGGAAATT 
CCAGAATGCG ATACCTTTGA ACTAGCAAAA TCATTGCTTG CGAACGGTGT GGCTGTTGTA 
CCTAGCCCAG TGTTCTATCC AGAAGGATCA GAAGTAAAAG CAGCGCTGCG CCTCAACTTC 
ACTAACGCAA CGCCTGAAGA GCTCAAAGTT GCCGTGACTC GTTTAGCCGA CGTACTGAAC 
GCACTGTAA
 
Protein sequence
MEIAQSLQHV KSSYIREILA AASDKNVISL AGGLPDEKTF PIDLMKPTLE NLANMPEVFQ 
YGSTAGYAPL LEFLNGYFKL PETHAAMITT GSQQGLDLIA RAYVNPGDKV VMEAPSYLGA 
MQVFGLVQAD IVTVSQTEFG PNLEELEQCF AEQKPKMFYA VPDFHNPTGV CWALETRQKV 
AELCIQYNVA FIEDAPYREL RFSGEALPLV SDFCPQHSIV LRSFSKIASP GLRIGVVTGK 
SSYLEPLIKI KQGADLHSSV PMQALLHGLL QHDNFETHIS TICELYKSRY DVMYAELEKQ 
LPSNCVLKPV DGGMFVWVEI PECDTFELAK SLLANGVAVV PSPVFYPEGS EVKAALRLNF 
TNATPEELKV AVTRLADVLN AL