Gene VIBHAR_06460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06460 
Symbol 
ID5557144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1617274 
End bp1618209 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content44% 
IMG OID640910933 
ProductRNA-directed DNA polymerase 
Protein accessionYP_001448578 
Protein GI156977672 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGGAT CCCTCAGCAT CAAAGCCTGT TTCGACAAGA TTGGGCATCA ATGGCTTATG 
AACAACATTG CCGTGGATAA ACGCATGTTG GAACAATGGT TAAAGTCTGG TTTTATGGAC
AAAGGGCTGT TCTATCGTAC AGATGAGGGA ACACCTCAAG GCGGGGTTAT ATCCCCCACC
TTGATGCTAA TGACCCTTGC AGGAATTGAG CTGCGCATAA AGTCTACCGC TCTCAAAAAG
GGGGCAAGAG CTAACTTTAT TGGATACGCC GACGATTTCG TCGTCACCTG TGCTTCAAAG
GAAGTGCTGG AGAACGATAT CAAACCGTTG ATTGCTGATT TCTTAGCAGA AAGAGGCTTA
ACACTCTCCG AAGAGAAAAC GCACATTACT CATATCAGTC GTGGTTTTGA TTTCCTAGGT
TTTAACCATA GGAAGTACAA AGGAAAATTG CTCATTAAAC CGAGTAAATC CAACACACTG
TTGTTCTTGA GTAACTTGCG CGAACTCATC AAAAAGCACG CAACTATCCC CGTCAACGAT
TTAATCAAAT TGATAAATCC GAAACTACGG GGCTGGTCGA ATTACTATCG ACACTGCGTG
GCCAAACAGG TATTCGGATA TGTAGGTCAC AAGCTATTCC ATACGCTATG GCACTGGGCT
AAAAGGCGTC ATCCAACCAA ATCGAGAACT TGGATCGCTC TTAAGTACTT CATCAACCGT
CAAGGCCAAT GGCAATTTCA CGGTTGGCAG AAGATCATGA ATATGGATTG TCAGTTCAAT
CTGTTTCAAA TAGCCAAGGT GCCAATAGAG AGACATGTGA AAATCAGGAG TGCCGCAACG
CCTTTTGACC CTCAATACCA AGAATACTTG GCAAAGAGAA AGTCAAAAAG GCAATGTCGT
AACTCTTGGC ATGAGCCTGC TCTCGCTGCT TTATAA
 
Protein sequence
MWGSLSIKAC FDKIGHQWLM NNIAVDKRML EQWLKSGFMD KGLFYRTDEG TPQGGVISPT 
LMLMTLAGIE LRIKSTALKK GARANFIGYA DDFVVTCASK EVLENDIKPL IADFLAERGL
TLSEEKTHIT HISRGFDFLG FNHRKYKGKL LIKPSKSNTL LFLSNLRELI KKHATIPVND
LIKLINPKLR GWSNYYRHCV AKQVFGYVGH KLFHTLWHWA KRRHPTKSRT WIALKYFINR
QGQWQFHGWQ KIMNMDCQFN LFQIAKVPIE RHVKIRSAAT PFDPQYQEYL AKRKSKRQCR
NSWHEPALAA L