Gene VIBHAR_06458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06458 
Symbol 
ID5557142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1615355 
End bp1615963 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID640910931 
ProductRNA-directed DNA polymerase 
Protein accessionYP_001448576 
Protein GI156977670 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGAGA ATTTGAAGAA CTTTATTCAA GGAGAAACGC AAATGATGAT TTCAAAAGAG 
ATTAGTGCCT CTCCTGACAG TGCTCAGTGG CAATCCATAA ATTGGAAAGC CGTTGAATCC 
CATGTTTTAA AGCTTCAGAT GCGTATTGCA AAGGCAACAC GAGAAGGTAA ACACGGCAAA 
GCGAAAGCAT TGCAGTGGAT ACTGACTCAC TCGCGCTCAG CAAAACTTCT TGCTGTTAAG 
CGGGTATCAC AAAATAAAGG CAGTAAAACG CCTGGAATTG ACGGCGTTAT CTGGAATACA 
GATACGCGCC GCATGAAAGC AGTCAATCAA TTGAGCAGAA AAGCTTATCT AGCCAAACCG 
CTCAAGCGTA TCTACATCCC CAAGAAAAAC GGCAAACTCA GACCACTGGG TATCCCCTGT 
ATGGTCGATA GAGCGCAGCA AGCGCTTCAT CTTCTTGCAC TAGAGCCAGT ATCAGAAACA 
CTTGCCGATC CTAACAGCTA TGGATTTAGA CCAAATCGAA GCACTGCTGA TGCTATCGCG 
CAGTGCTTCA AGTGTCTGGC ACTAAAGAAA TCAGCTCAGT GGGTACTTGA GGGAGACATC 
AAAGCCTGA
 
Protein sequence
MQENLKNFIQ GETQMMISKE ISASPDSAQW QSINWKAVES HVLKLQMRIA KATREGKHGK 
AKALQWILTH SRSAKLLAVK RVSQNKGSKT PGIDGVIWNT DTRRMKAVNQ LSRKAYLAKP 
LKRIYIPKKN GKLRPLGIPC MVDRAQQALH LLALEPVSET LADPNSYGFR PNRSTADAIA 
QCFKCLALKK SAQWVLEGDI KA