| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06452 |
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| Symbol | |
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| ID | 5557135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 1608945 |
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| End bp | 1610516 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640910925 |
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| Product | ABC-type RTX toxin transporter ATPase and permease components |
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| Protein accession | YP_001448570 |
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| Protein GI | 156977664 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCC TAGTGACTCC CTTGGTGTTT GAGAATGTGA TCGACCGCGT CTTGGTCAGT
CGGAGTGTGT CTAGTTTGCA CGTATTGGGC ATCGCGTTGT TGACCATGGC GGTGTTTGAA
CCGCTGTTTG GCTATCTGCG CAGTTGGATG TATGCCAATT TGGCCAACAA ATTGAACGCC
GAGTTGAGCG CTCGTTTGTA CGCCCACTTA ATGGCCTTGC CACTGCGCTA TTTCAACCAG
CGCCAGACCG GCCAAATCAC CGCCAGAGTG CGCGAAATGG ACCAGATCCG CCAGTTTTTG
GCAGGCTCTG CCTTGACACT GATACTGGAC TTGGTGTTTG TCGGGATCTT TATCGCCGTG
TTGTTTGCCT ATGCGCCGTT CTTGACGTGG TTAGTACTGG GTTCGCTGGT CCTGTATTTC
GTGTTCTGGC TCGCTATCGG CCCCACGCTT CGTGCCAAAG TGACCAAGGA ATACGAAACC
GCGGCGGATA ATACCGCGTT TCTTACGGAA TCCATCTCGG GTATTGAGAC GGTTAAGACC
AACACGTTAG AGCCGAGTTT TGAAAAACGC TGGCAACATC ATCTCGCAGG ACAACTGAAG
GCCGGCTTCA GAGCGCGAGT GGTATCGATT TGGGCAGAGC AAGGGATTGG CTTGATCCAA
AAATTGACCG CCGCGCTTAC GTTATGGTGG GGGGTAAAAT TGGTGCTTGC GGGCGAGCTA
TCACCAGGGG AGCTGGTGGC ATTTAACATG CTCGCGGGTC AGGTCACGCA ACCTATCTTA
CGCCTGGCGC AAGTCTGGCA AGATTTTCAG CACACCTTGA TCGCTTTGCG CCGCGTGGGG
GATATTTTAT ACGAACCTCA AGAAGCGGGG AGTGGGGGGC TTGCCTCAAT CCCATCGATG
CGGGGTGAGG TGACGTTTAA TCAAGTGCGA TTTCGCTATG ATACGGACGC CCCAGAAGTG
TTGAAGAATC TCAGTTTGAC GATCAAAGCC GGTGAATTTG TTGGCATCAC CGGGCGCTCC
GGATCGGGCA AGAGTACGCT AACGAAATTG CTGCAGCGCC TCTATGTGCC AACTTCCGGC
CAAGTCTTGG TCGATGGAAT GGACTTGGCC ATTGCCGACC CGGTTGAGTT GCGACGAAAT
ATGAGTGTGG TGTTGCAAGA AAGCTGCCTG TTTGGCGGGA CCATCGCCGA CAATATCCGA
CAGTGCGCGC CAAATGCTTC GGACGAAGCG ATCGTGCAGG CCGCCCAACT TGCCGGCGCG
CATGATTTCA TTCTCGACCT GCCCCAAGGG TACAACGCGC AAGTAGGGGA AAGTGGCAGT
CGCCTTTCAG GAGGGCAGCG GCAGCGAATA GCATTGGCGC GCGCCCTCAT CACCAATCCG
CGCATTTTGA TACTCGACGA AGCGACCAGC GCGCTTGATT ACGAATCAGA AGCAGCAATT
ATCTCGCGAC TGCCCGAGAT CTCGCAAGGT CGAACGGTGA TCAGTATTGC GCATCGACTC
TCGACACTCG CACATTGTGA TCGGGTGATT AATCTATCTC TCGACGGGCA ATGTCAGCCC
CAACATATAT AA
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| Protein sequence | MIALVTPLVF ENVIDRVLVS RSVSSLHVLG IALLTMAVFE PLFGYLRSWM YANLANKLNA
ELSARLYAHL MALPLRYFNQ RQTGQITARV REMDQIRQFL AGSALTLILD LVFVGIFIAV
LFAYAPFLTW LVLGSLVLYF VFWLAIGPTL RAKVTKEYET AADNTAFLTE SISGIETVKT
NTLEPSFEKR WQHHLAGQLK AGFRARVVSI WAEQGIGLIQ KLTAALTLWW GVKLVLAGEL
SPGELVAFNM LAGQVTQPIL RLAQVWQDFQ HTLIALRRVG DILYEPQEAG SGGLASIPSM
RGEVTFNQVR FRYDTDAPEV LKNLSLTIKA GEFVGITGRS GSGKSTLTKL LQRLYVPTSG
QVLVDGMDLA IADPVELRRN MSVVLQESCL FGGTIADNIR QCAPNASDEA IVQAAQLAGA
HDFILDLPQG YNAQVGESGS RLSGGQRQRI ALARALITNP RILILDEATS ALDYESEAAI
ISRLPEISQG RTVISIAHRL STLAHCDRVI NLSLDGQCQP QHI
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