| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06448 |
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| Symbol | |
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| ID | 5557201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 1604427 |
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| End bp | 1607765 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640910921 |
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| Product | hemolysin A |
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| Protein accession | YP_001448566 |
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| Protein GI | 156977660 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTGA CGAATGACTT ACAAAAAGAA TTAGATGCAA AACTGGCGAC TGTCCAAGGA
CAAGATGTCG GAAAACGGGA CTTTAGTGTC AGTGAAGCCA TTGAGCTCTT GGACTCGTTT
AAGGGGAATC TGGCAAGCAA TTTGGTTGAT TTTCCGACGA GTATACCCAA CCACCTTTCA
GCTGGTGCGG CAGCGTTAGG CACCGCGATT TCCAATACGT ATAACCATGC CAAGGCGAAT
GTCTCGAGCA GTGATCTGTA TGGGCTTCAC TCCCAAAAGG TGGTGTCGGC GATTGACAAC
TCCATAATTG CGAGCGGGGC ACGCGCATTT AACTCCACTG TAAGCGGTAT GGCGGTTGGC
GTGGCTGTCG AACTCTACAG CTATTCGCAA AGTAATAGTA ATGACCTTGA GCTGCTCAAT
AAGAAAATCA TCGGTGTAGT TGGTAGTGCT GCATTGGGAG CAGGGTTAGC GAAAACGTTC
ATCGCTCTGC TTGGAGGTGC CGCAACTGCA GCAGTCTCGA TTCCAGTGGC GGGATTAGCC
ACCTTGGCTG CGGCGATTAT CGCAGGCGCG ATTGCAACCG AAGTGATTGA GTCAGATTGG
TTCAACGACT TGTATGACTC TGCCTATGAT AACATGCAAG ATCTGTTTGG CTGGCGCCCA
GCCCCTCCTC CACATCGTGA TCCTTTGATC TTGGATTTGG ACGGTAATGG TGTGTCGTTA
ACCGAAAGTA CTTATTTTGA CCACAACGCC AATGGTATTG CGAATCGGAC GCAGTGGGTA
TCTTCAACTG ATGGATTGTT GGCGCTAGAT CGAGATGGCA ACGGCACTAT CGACAGTGGC
CGAGAGCTGT TTGGTGATAA TACGCTCGAT GCCAACGGGG ATGTAGCATC AGATGGTTAT
GCTGCGCTAA AAGCATTTGA TTCTAATGGT GATGATGTCA TCAACCAAAA AGACCAGGTG
TTTGACCAGT TAAAAGTGTG GGTCGATGCC AATAGCGATG GCGTTAGTCA GGAAAACGAG
TTGAAAACGC TTAAATCGCT CGGCGTAGAA TCGATCGACT TAACTCACGA TAACCTACAC
AGTCAGTACC ATGACACGAG TGGCAAAAGT CATCAAACGC AGAGTGTGAA CCTTGACGTG
AATAATTTCG ATCGTCGCTT TGTCGAGTCT TTAGCAGTGC CGGAGTCGTT TAGCTCTTTG
CCTGACATGA GAGGCACAGG CACGGTACGC GATCTGCACG AGGCCATGAC CTTATCAGGA
CAGTTGAGCG GACAAATTGA ACAATTTGCC TCGTCGAGTT CTCGTGACGA ACAAGTGGCA
CTGAGTGAGA AAATTCTGTT TTCCTGGGCA AAGACGAGTC AGTACTACGA TGAGCATATT
CCTGTATTTT CTGGCCCGGA AATCGACAAA GTGTATGCGA TAGAGGCCTT CTATGGCGAC
AAGGTTCCAT GGGCGGTGTC ATTTGGTACA AATGGTGCGG CGTTGGCATT ACCAACAGGG
ATGATTAACA ATGCCTACGA CTCATTAGTG AAGATGATCT ATTTCGAGCT TGCCAGTCAA
ACGCGTCTCA AAGGCTATTA TGACGCAGTG ACCATTTTCT CGAATGAATC CAGTGTGTAT
CTTTCTCTTG AAGGAGCCCT TGATAAGTTC ACTAGCCAAC CGCTTAGCTC TGCACTGATA
GCTGACGCAA TGGACTTTGT ATCTGCGATG TCATCAACGT CTAACGGAGA GTTAACCGGA
TTCTATACAT TAATTTCAGA TGCTCTGTAT GGATTTACAG ACGCAGATAT TGGTGAGTTG
CAGTCAGCAA TGGACTTTAA TGGCATTGCA TTGAGCAACG CTGGAGAGAT CAAAAAGGTC
ACCTTTAAGG ATGGGGCAGT TACATTTACG GAAGGGTCAA CATCGACGGA AATTACCGGG
GGAAGTGGCG CGGATGTATT AAGCGGTACG AGTTTGGATG ATGTCATTCA TACTGGCTCT
GGTAACGACG TGGGGCATGG CGGTGTCGGC GACGATACGT TGCATGGCCA GGATGGCAAT
GATCAGTTGT TTGGTGACCA AGGTAACGAC ACGTTAACGG TCAGCGGACG CGGGTCGAAC
TCGCTGGATG GCGGTGAAGG TGACGACACG TTAACGGTCA GCAATAACAC CGATTACCGC
TATCAGCGCG ACGTGCTCAG TCACGCTCGG AATACCTTAG CGGGCGGAAA AGGCAACGAT
CGACTGGTAG GGCACGCTGG GGCAGAGACA TACCTGTTTA ACCGAGGAGA CGGTCAAGAC
ACCATCCGTG ATTATGACCA TCGCATTAAC TCGTCGAGCG AGGGATGGAA TAAGACCGAC
CGCATTGTGT TGGGTGAAGG CATTCGTTTG GAGGAGTTGA GCTTACGCCG TGACGGCAAC
CATATGGTGC TCGTGATTGG CGGTCTTGAG TCAGGGGATT CGATCACGAT AGAGAACGCG
TACACCGACA AGCGTTATCG CATCGAGGAG ATTGAATTGG CCGATGGCAG CCGCGTGGCG
CCTTACAGCT TACCGCTGTT TGCCACAGCC GGAGACGATG TGGTGCAAGG CAGCGGTTAC
GCTGAAAAAG TGGAGTTGCA AGCGGGTGAC GATGTGGTGC ATGCGGGCTC AGGCAATGAC
GAAGTGCATG GGGGCTTGGG CGACGACACG TTGCATGGCC AGGATGGCAA TGATCAGTTG
TTTGGTGATC AAGGCAACGA CACGTTAACC GTCAGCGGAC GCGGGTCAAA CTCGCTGGAT
GGCGGTGAAG GTGACGACAC GTTAACGGTC AGCAATAACA CCGATTACCG CTATCAGCGC
GACGTACTCA GTCACGCTCG GAATACCTTA GCGGGCGGAA AAGGCAACGA TCGACTCGAA
GGGCACGCTG GGGCAGAGAC ATACCTGTTT AACCGAGGAG ACGGTCAAGA CACCATCCGT
GATTATGACC ATCGCATCAA CTCGTCGAGC GAGGGATGGA ATAAGACCGA CCGCATTGTG
TTGGGTGAAG GCATTCGTCT GGAGGAGTTG AGCTTACGCC GTGACGGCAA CCATATGGTG
CTCGTGATTG GCGGTCTTGA GTCAGGGGAT TCGATCACGA TAGAGAACGC GTACACCGAC
AAGCGCTATC GCATTGAAGA AGTGGTGTTA AGTGAGGGCA GTAAGGTGTC GCCGTTTGAC
CTCCCAGACT ATGTGGAGCC GGTCATTGAG ACGGACTTAC TTGTCCAAGC GATGAGTGCG
TTTGATGCGC AAGAAAGTGT GGCAAATAAC GCTGTTATTG ACAGTGTTGC TTCTTCATTG
TCACCCAACG TTGTCGTCAG TGGACAAAGC TCGTTGTAA
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| Protein sequence | MSLTNDLQKE LDAKLATVQG QDVGKRDFSV SEAIELLDSF KGNLASNLVD FPTSIPNHLS
AGAAALGTAI SNTYNHAKAN VSSSDLYGLH SQKVVSAIDN SIIASGARAF NSTVSGMAVG
VAVELYSYSQ SNSNDLELLN KKIIGVVGSA ALGAGLAKTF IALLGGAATA AVSIPVAGLA
TLAAAIIAGA IATEVIESDW FNDLYDSAYD NMQDLFGWRP APPPHRDPLI LDLDGNGVSL
TESTYFDHNA NGIANRTQWV SSTDGLLALD RDGNGTIDSG RELFGDNTLD ANGDVASDGY
AALKAFDSNG DDVINQKDQV FDQLKVWVDA NSDGVSQENE LKTLKSLGVE SIDLTHDNLH
SQYHDTSGKS HQTQSVNLDV NNFDRRFVES LAVPESFSSL PDMRGTGTVR DLHEAMTLSG
QLSGQIEQFA SSSSRDEQVA LSEKILFSWA KTSQYYDEHI PVFSGPEIDK VYAIEAFYGD
KVPWAVSFGT NGAALALPTG MINNAYDSLV KMIYFELASQ TRLKGYYDAV TIFSNESSVY
LSLEGALDKF TSQPLSSALI ADAMDFVSAM SSTSNGELTG FYTLISDALY GFTDADIGEL
QSAMDFNGIA LSNAGEIKKV TFKDGAVTFT EGSTSTEITG GSGADVLSGT SLDDVIHTGS
GNDVGHGGVG DDTLHGQDGN DQLFGDQGND TLTVSGRGSN SLDGGEGDDT LTVSNNTDYR
YQRDVLSHAR NTLAGGKGND RLVGHAGAET YLFNRGDGQD TIRDYDHRIN SSSEGWNKTD
RIVLGEGIRL EELSLRRDGN HMVLVIGGLE SGDSITIENA YTDKRYRIEE IELADGSRVA
PYSLPLFATA GDDVVQGSGY AEKVELQAGD DVVHAGSGND EVHGGLGDDT LHGQDGNDQL
FGDQGNDTLT VSGRGSNSLD GGEGDDTLTV SNNTDYRYQR DVLSHARNTL AGGKGNDRLE
GHAGAETYLF NRGDGQDTIR DYDHRINSSS EGWNKTDRIV LGEGIRLEEL SLRRDGNHMV
LVIGGLESGD SITIENAYTD KRYRIEEVVL SEGSKVSPFD LPDYVEPVIE TDLLVQAMSA
FDAQESVANN AVIDSVASSL SPNVVVSGQS SL
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