Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06394 |
Symbol | |
ID | 5557557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1562818 |
End bp | 1563570 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640910867 |
Product | hypothetical protein |
Protein accession | YP_001448512 |
Protein GI | 156977606 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACC TAAACGTCCG CCAGCAAAGC ATCATTGAAC TGGTTCATCA GCAAGAATAT TGTTCGATAG AAGAGCTTGC TCAACGCTTT GAAGTCACGA CGCAAACCAT TCGACGTGAC ATCAATCAGC TTTGCCAATT AGGACTGACC CGACGCCATC ATGGTGGTGT CGGATTGCCT GCTACCTTAA GCAACCGCAG TTATGCCTCT CGCCAAGTCA CCAATCAACA AGAAAAGCAG ACCATCGCCG ATGAAGTGGT CAAAGCAATC CCTAACGGTT CGACTTTATT TCTGGGTATC GGCACGACTA TCGCGTTGAT TGCCGAGCGT TTGGCGAACC ACAGCGAGCT TCGTGTGGTG ACGAATAACT TCGAAGCGGC ACACATTCTT TCTCACTTTG AGAATATTGA AACTTGGATT CCCGGTGGGC GTATTCGTAC CAACGATCGC GACGTGGTAG ATGGCTCCGC AGAGCTGTTT TATGGTCAGT TCTCGGCGGA TATTGGCATT ATTGGTTGTG CAGGCGTGAC CGAAATCGCG CAGTCGCATT CCGACATGAT CAACCTTGGC AGCACAACGA TTGATACTCA GTCGTTCGCA ATGGAACACG AATTACGAGA AGCCAAAGTG AGCCAAGCGA TTTTGGCTAA CTCGGAGCAA AAGTGGCTGG TGGCGAACAA CAGCAAATGG CAGCGCAGAG CCAATACTAA GGTGGCTCCG CTTAGTTATT TTGATCGCGT TTTCAGTAAC TAA
|
Protein sequence | MNNLNVRQQS IIELVHQQEY CSIEELAQRF EVTTQTIRRD INQLCQLGLT RRHHGGVGLP ATLSNRSYAS RQVTNQQEKQ TIADEVVKAI PNGSTLFLGI GTTIALIAER LANHSELRVV TNNFEAAHIL SHFENIETWI PGGRIRTNDR DVVDGSAELF YGQFSADIGI IGCAGVTEIA QSHSDMINLG STTIDTQSFA MEHELREAKV SQAILANSEQ KWLVANNSKW QRRANTKVAP LSYFDRVFSN
|
| |