Gene VIBHAR_06378 details

Gene Information

• Locus tag: VIBHAR_06378
• ID: 5557691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1550257
• End bp: 1550787
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640910851
• Product: spermidine n1-acetyltransferase
• Protein accession: YP_001448496
• Protein GI: 156977590
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATG GTCTCACAAT TCGTGCTTTA GAACGTTCAG ACCTGCGCTT TATTCACGAC 
CTCAACAATA ACCGTAATAT CATGACGTAT TGGTTCGAAG AACCGTACGA ATCCCACGAT 
GAATTAGAAG AGCTTTACCG TAAACATATT CACGACGACG CCGAGCGCCG CTTTGTAGTG 
GAAGATGAAC ACGGCGTATT AATTGGTCTG GTAGAGCTGA TTGAGATTAA CTACATTCAC 
CGTAGTGCTG AATTCCAAAT CATCATCGCA CCAGATCATC AAGGGCGAGG TTATGCCGAA 
GAGGTGATCA ATCGAGCTTT GGATTATTCG TTCTCAATTC TTAACCTGCA CAAAATCTAT 
TTGTTAGTTG CCTTAGACAA CGAAAAAGCA ATTCACCTTT ACCAGAAGTG CGGTTTCATT 
GAGGAAGGTC ATCTCGTGCA AGAGTACTTC ATTAACGGTA GCTACCGCGA TGTAAAACGC 
ATGTACATTC TTCAAAACCA ATACCGCGAA AAACTCGAGA ACAATCAATA A 

 

Protein sequence

MKNGLTIRAL ERSDLRFIHD LNNNRNIMTY WFEEPYESHD ELEELYRKHI HDDAERRFVV 
EDEHGVLIGL VELIEINYIH RSAEFQIIIA PDHQGRGYAE EVINRALDYS FSILNLHKIY 
LLVALDNEKA IHLYQKCGFI EEGHLVQEYF INGSYRDVKR MYILQNQYRE KLENNQ