Gene VIBHAR_06368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06368 
Symbol 
ID5557521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1542432 
End bp1543055 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content38% 
IMG OID640910841 
Productputative threonine efflux protein 
Protein accessionYP_001448486 
Protein GI156977580 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATA ACCTTTGGAT TGCTTTTTTT ATCGCTTCTC TGATGCTTGC TATTTCCCCC 
GGAGCGGGTG CCATAAATAG TATGTCTATT ACGATGAAAT ATGGCCTAAA AACGAGTTTG 
ATAGCGAATT TAGGCCTGCA GTGTGGGAAC GTATTTAATA TCACAGTTGT TGGTATTGGG 
CTTGGGGCAT TATTAGTCAA ATCAGAAGTG TTATTCTCGT TGATAAAGTG GGTTGGGGTA 
GGTTATCTGA TTTATTTAGG TATCAAAAAG TTTAAAGAGC TGCCAGAACT TGCTGATAAA 
GCAGAATCGA TAAATACACA AAGCTCTTCT AAATTGTTTT TTCAATCGAT ATTGGTCAAC 
ATTACTAACC CAAAAAGTAT CGTTTTTTTG ATTGCACTGT TACCGCAGTT TATTGTTCCT 
ACATACTCTT ATCACGAGCA ATTACTGATA TTAGGTACGA CCTTGATTCT CATTGATGGA 
ACTGTGATGT TTGGCTATTC ATTGGTTGCT AGTCGTATTG CCAAGTCAGT TCAAGAGCCG 
AAAAATGCCG TCATATTGAA TCGAATTTTT GGCAGTATGT TTGTTGGGGC AGGTACTCTA 
CTGGCCTTTG GCAGCAGAAG CTAG
 
Protein sequence
MDYNLWIAFF IASLMLAISP GAGAINSMSI TMKYGLKTSL IANLGLQCGN VFNITVVGIG 
LGALLVKSEV LFSLIKWVGV GYLIYLGIKK FKELPELADK AESINTQSSS KLFFQSILVN 
ITNPKSIVFL IALLPQFIVP TYSYHEQLLI LGTTLILIDG TVMFGYSLVA SRIAKSVQEP 
KNAVILNRIF GSMFVGAGTL LAFGSRS