Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06366 |
Symbol | |
ID | 5557519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1538534 |
End bp | 1541713 |
Gene Length | 3180 bp |
Protein Length | 1059 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640910839 |
Product | hypothetical protein |
Protein accession | YP_001448484 |
Protein GI | 156977578 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAATG CTATTATTCG TTGGTCACTG AGCAACCGAT TCCTAGTGTT GGTCGCGACC TTAGCCCTTG TATTAGGCGG GCTTTACAGT GTAAAGAATA CGCCTGTTGA TGCGATTCCG GATCTTTCTG ATGTGCAAGT GATCATCAAA ACAAGCTATC CGGGGCAAGC TCCTCAAGTT GTCGAGGATC AAGTCACTTA CACGCTCACC ACCGCCATGC TCGCCGTGCC GGGGGCCGAG ACAGTTCGTG GCTACTCTTT CTTTGGTGAC TCTTACGTTT ATATCATTTT CAACGATGAT ACCGACATGT ACTGGGCACG TTCACGCGTG CTGGAGTACT TAAGCCAAGT AGCACCAAAG CTACCACCAA ACGCAAAACC GACGTTAGGT CCTGATGCAA CGGGTGTGGG CTGGGTTTAC AGCTACGTAT TACAAGACAA AACCGGTAAG CACGATTTAG CCGAACTTCG TAGCCTGCAA GACTGGTTCT TGAAGTACGA ACTGCAAACC GTTGATGGCG TTTCTGAAGT CGCGACCGTT GGCGGCATGG TTAAGCAGTA CCAAGTACAA ATTGATCCTG CCAAGCTGCG TGCGTACAAC CTCACTTTGC AACAAGTGAA CATGGCAATC CAAAACGGCA ACCAAGAAAC CGGCGCGTCC GTTATCGAAG TGGCCGAAGC TGAACACATG GTTCGTACCA CGGGTTACCT AACCAGCATT GAAGACATCA AATCACTGCC TCTAAAAGTC ACCGAGAAAG GCACGCCTTT GCTACTAGGC GACATCGCAG ACATTAACCT TGGTCCACAG ATGCGTCGTG GTATCTCAGA ACTAAATGGC GAAGGAGAAG CCGTTGGTGG CGTTATCGTA ATGCGCTTTG GCGAGAACGC GAGTGAAGTC ATTGCGAAAG TCAAAGACAA GCTTGCAGAC CTACAGCGCG GCCTACCAGA AGGTGTTGAA ATTGTTGCGA CTTACGACCG TTCGACTCTG ATTGATGCAG CAGTAGAAAA CCTATGGAAG AAACTCGCAG AAGAGTTCAT CGTCGTTGCG ATTGTGTGTG CGTTGTTCTT ATTCCACATT CGTTCTTCGT TGGTTATCGC TCTGAGCCTA CCGGTCGGCA TTCTTACGGC GTTTATCGTG ATGCATTGGC AAGGTATTAA TGCCAACATT ATGTCCCTTG GCGGTATCGC GATTGCCATC GGCGCCATGG TGGATGGTGC AATCGTTATG ATCGAAAACG TTCACAAGCA CATTGAACGA ACGCCACTGA CCGATAAAAA CCGATGGCAA GTCATCAGTA AGGCGGCCGA AGAAGTCGGC GCTCCGCTGT TCTTCTCGTT GCTGATCATT ACTCTAAGCT TCGTGCCTGT GTTCGCCTTA GAAGGTCAGG AAGGCAAGAT GTTCTCGCCA CTTGCCTTCA CTAAGACGTA CGCCATGGCA GCGGCAGCAG GTTTGGCAAT CACACTCGTC CCTGTACTTA TGGGTTACTT CATTCGCGGT AAGGTGCTAC CGGAGCACAA AAGCCCGGTT AACCGCGGCT TGGTCGCGTT GTACCGTCCG CTGTTGAACA CCAGCTTAAA ATACCCTAAG ACCATGATTG TTATCGCATT AGGTCTAATG GCGTCGGCTT ATTACCCAAC CAGTAAGCTG GGTAGCGAGT TCATCCCGCC GCTGGATGAA GGTGACTTAA TGTACATGCC AACAACCTAT CCGGGCATCT CGATTGGTAA GGCTCGTGAG CTGCTACAGC AAACCAATAA GCTGATCAAA ACCGTCCCTG AAGTACAGAC GGTATGGGGC AAGATTGGTC GAGCTGAGAC CGCAACCGAT CCAGCGCCAC TCACCATGAT TGAAACCGTG ATTCAGTTGA AGCCACGCGA TCAATGGCGT GAAGGGGTAA CGACAGAATC ACTGCGTAAA GAGTTCGATG ATCTAGTGCA ATTCCCGGGA TTAACCAACG CTTGGGTAAT GCCAATCAAA ACGCGTATCG ACATGCTAGC AACGGGCGTC AAAACCCCTA TCGGCATCAA GATCGCGGGG CCTGATCTGA AAGTAATTGA GAAGATCGGT TCTCAGTTGG AGCCAATTCT TAATGGCGTT CAAGGTACTG CATCGGTTTA CGCCGAGCGT GTAGCAGGCG GTCGCTATGT CACAATCGAC ATTAAGCGTC GTGCGGCGGC TCGTTACGGC TTAAGCATCA AAGACGTTCA GCAGGTGATC TCGACCGCGG TGGGCGGCAT GAATGTGGGT GAAACCATCG AAGGCTTGGA GCGTTACCCA ATCAATGTTC GTTACCCACA AGACTACCGT GACTCGGTGG TAAAACTGCA AAACCTGCCG TTAGTCACTC CAAATGGCGC TCGTATCGCA CTGGCTGATG TCGCGGACAT CCGTTACGAA GACGGCCCTC CGATGATTAA GACAGAAAAC GCACGCCCGA ACGGCTGGGT ATTTGTCGAT ATCGATGTTC GTGATCTTGG CTCTTACGTC GTGGAAGCAC AGCAAGTCGT GGCTGATCAA TTGGAACTTC CTGCGGGTTA CTCGCTGGCT TGGTCTGGTC AATACGAATA CATGGAGCGT GCAAAAGACC GCTTGAGCGT CGTGGTACCA ATCACCATCG CCATCATTAT GCTGCTGCTT TACTTCAGCT TCCGTCGCGT TGGCGAAGTG ATGATCATCA TGCTTACCCT ACCGCTCGCT ATGGTCGGTG GTTTGTGGCT CATGCATATC CTCAACTACA ACTTCTCAAT TGCCGTTGGG GTCGGCTTTA TTGCCCTAGC AGGCGTCGCG GTTGAAATTG GGGTCATCAT GCTCGTCTAC CTCAACCAAG CATGGCACCA CAAGAAGCTG GATGCAGAAG AGAGCCAACA GAAGCTTGAG GCGAAAGACC TAACCGATGC TATTCATGAA GGTGCAGGCC TGCGTGTCCG CCCAGTAATG ATGACGGTAC TGACGGTCAT TATTGGCCTT ATTCCAATCA TGTACGGTGA GGGTACAGGG TCAGAAGTAA TGCAACGTAT CGCCGCGCCA ATGATTGGTG GTATGGCATC AGCACTACTA CTGACGCTAT TAGTACTGCC AGCCATCTTC AAGCTGTGGA AACAACGTGA GTTGTGCCAA AGCAATGCGA CTAATCGTCA AGCTAGCACA CAAGCTAGTG ATGTAAACAA CAACGCTTAA
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Protein sequence | MINAIIRWSL SNRFLVLVAT LALVLGGLYS VKNTPVDAIP DLSDVQVIIK TSYPGQAPQV VEDQVTYTLT TAMLAVPGAE TVRGYSFFGD SYVYIIFNDD TDMYWARSRV LEYLSQVAPK LPPNAKPTLG PDATGVGWVY SYVLQDKTGK HDLAELRSLQ DWFLKYELQT VDGVSEVATV GGMVKQYQVQ IDPAKLRAYN LTLQQVNMAI QNGNQETGAS VIEVAEAEHM VRTTGYLTSI EDIKSLPLKV TEKGTPLLLG DIADINLGPQ MRRGISELNG EGEAVGGVIV MRFGENASEV IAKVKDKLAD LQRGLPEGVE IVATYDRSTL IDAAVENLWK KLAEEFIVVA IVCALFLFHI RSSLVIALSL PVGILTAFIV MHWQGINANI MSLGGIAIAI GAMVDGAIVM IENVHKHIER TPLTDKNRWQ VISKAAEEVG APLFFSLLII TLSFVPVFAL EGQEGKMFSP LAFTKTYAMA AAAGLAITLV PVLMGYFIRG KVLPEHKSPV NRGLVALYRP LLNTSLKYPK TMIVIALGLM ASAYYPTSKL GSEFIPPLDE GDLMYMPTTY PGISIGKARE LLQQTNKLIK TVPEVQTVWG KIGRAETATD PAPLTMIETV IQLKPRDQWR EGVTTESLRK EFDDLVQFPG LTNAWVMPIK TRIDMLATGV KTPIGIKIAG PDLKVIEKIG SQLEPILNGV QGTASVYAER VAGGRYVTID IKRRAAARYG LSIKDVQQVI STAVGGMNVG ETIEGLERYP INVRYPQDYR DSVVKLQNLP LVTPNGARIA LADVADIRYE DGPPMIKTEN ARPNGWVFVD IDVRDLGSYV VEAQQVVADQ LELPAGYSLA WSGQYEYMER AKDRLSVVVP ITIAIIMLLL YFSFRRVGEV MIIMLTLPLA MVGGLWLMHI LNYNFSIAVG VGFIALAGVA VEIGVIMLVY LNQAWHHKKL DAEESQQKLE AKDLTDAIHE GAGLRVRPVM MTVLTVIIGL IPIMYGEGTG SEVMQRIAAP MIGGMASALL LTLLVLPAIF KLWKQRELCQ SNATNRQAST QASDVNNNA
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