Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06365 |
Symbol | |
ID | 5557518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1536798 |
End bp | 1538531 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640910838 |
Product | hypothetical protein |
Protein accession | YP_001448483 |
Protein GI | 156977577 |
COG category | [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG0845] Membrane-fusion protein [COG5569] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT TACAAGTTGC AACCATCGCG CTGATTGTTG GTGGTGCTTT AGGGTTTGGT GCTAATCATT TTCTTACGGG CTCGGCTCAC GACATGAGTG CGATGGGTGG CGAATCTGCT GCAAGCTCTA ACGATCCGCT TTACTGGGTT GCCCCAATGG ATCCGAACTA CAAACGCGAC AAGCCGGGCA AATCCCCAAT GGGCATGGAT TTAATTCCGG TTTACGCGGA AGATCTATCT GGTGAGAAAA GTGCACCGGG TACTATCACT ATCGACCCTT CCGTTGAAAA CAACCTGGGT GTAAAGACAG CAAAAGTCAC CTTGGAAAAA CTGTCCCCAC GTATCGAGAC CGTTGGTTAT ATTGCCTTTG ATGAAAGCCA TCTATGGCAA ACAAACGTTC GTGTTGCGGG TTGGGTAGAG AAACTTTACA TCAATGCTGT GGGTGAGAAG GTGAAGAAAG GCGATGTTCT TTTCACTCTC TACTCTCCAG AACTGGTTAA AGCACAAGAA GAGTTGCTGA ATGCTTACCG TACAGGCCGC CAAGGTCTAG TGAAAGGCGC AACTGAGCGT TTAGTGACGC TTGGTGTAGA CCGTGCTCAA ATCAAATCCA TTACTCGTAG TGGTAAAGCA TCGCAAACCA TTGAAATCAA AGCACCGGCT GACGGTGTCA TTGCAAGCTT AAACGTGCGT GAAGGTGGCT ATTTGTCCCC TGCTCAAGCG GTGATCAGTG CAGGTCCGTT GGACAATGTT TGGGTTGATG CAGAAGTCTT TGAGCGTCAA GCACACTGGA TGAAAGCGGG TTCTCAAGCC ACGATGACCC TTGACGCGAT TCCGGGCAAT GAATGGCAAG GTGTTGTCGA TTACGTGTAC CCAATCCTTG ATCCAACAAC ACGTACATTA CGTGTACGCC TTAAATTTCC TAACCCAAAT GGCGAATTAA AACCAAACAT GTTCGCTAAT ATTGCCCTTC AGCCTGTCAC TGACGACGCA GTATTAACGA TTCCTAAATC ATCTGTTATC CGCTCTGGTG GTATGACTCG CGTTGTTCTG GCTGAAGGTA ACGGCAAATA CCGCTCAGCT CGAATTGAAG TCGGTCGTGA AGCCGGAGAG CAAATCGAGG TATTACAAGG TTTGAAGCAA GATGACAAGA TAGTCACCTC TGCGCACTTC ATGCTCGATT CTGAATCTAG CCAATCTGCA GATCTATCTC GTATTAACGG TGTCGAACCA GAAGCAGAAA CGGCATGGGC AAAAGGTGAA ATCACCGATG TAATGAAAGA TCACCGCATG CTGACCATCA ACCACCAGCC GGTACCAGAG TGGGATTGGC CTGGCATGGC GATGAACTTC ACTTTCGCTG ATGGCGTTGA TATGGGTGAC TTGAAAAAAG GCCAAGCCAT TGAATTTGAA ATGCAAAAGA CAGAATCTGG CCAGTACCAA ATCATCGACT TCCATTCATC AAAAAGCACT ACTGACAAAA GCATCATTTC GGCAGAAGTT TGGCTAACTG GTGACATCAC AATGCTGATG GCCGACTTTG GCATGATCAC CTTAAACCAC TTACCGGTTG CAGAATGGAA CTGGGACGCA GGCGAGATGA ACTTCTCTGT GGGTGAAGAC GTTGATCTAA CGGGTTTTGA AGAAGGACAG AAAGTTCGGT TTCTAGTTGA AAAACAAGGG GCTGACTATG TTCTTAAACA GCTAATTCCT GCAACAACAG CCGTCGAGGG TTAA
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Protein sequence | MKTLQVATIA LIVGGALGFG ANHFLTGSAH DMSAMGGESA ASSNDPLYWV APMDPNYKRD KPGKSPMGMD LIPVYAEDLS GEKSAPGTIT IDPSVENNLG VKTAKVTLEK LSPRIETVGY IAFDESHLWQ TNVRVAGWVE KLYINAVGEK VKKGDVLFTL YSPELVKAQE ELLNAYRTGR QGLVKGATER LVTLGVDRAQ IKSITRSGKA SQTIEIKAPA DGVIASLNVR EGGYLSPAQA VISAGPLDNV WVDAEVFERQ AHWMKAGSQA TMTLDAIPGN EWQGVVDYVY PILDPTTRTL RVRLKFPNPN GELKPNMFAN IALQPVTDDA VLTIPKSSVI RSGGMTRVVL AEGNGKYRSA RIEVGREAGE QIEVLQGLKQ DDKIVTSAHF MLDSESSQSA DLSRINGVEP EAETAWAKGE ITDVMKDHRM LTINHQPVPE WDWPGMAMNF TFADGVDMGD LKKGQAIEFE MQKTESGQYQ IIDFHSSKST TDKSIISAEV WLTGDITMLM ADFGMITLNH LPVAEWNWDA GEMNFSVGED VDLTGFEEGQ KVRFLVEKQG ADYVLKQLIP ATTAVEG
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