Gene VIBHAR_06365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06365 
Symbol 
ID5557518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1536798 
End bp1538531 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content47% 
IMG OID640910838 
Producthypothetical protein 
Protein accessionYP_001448483 
Protein GI156977577 
COG category[M] Cell wall/membrane/envelope biogenesis
[S] Function unknown 
COG ID[COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT TACAAGTTGC AACCATCGCG CTGATTGTTG GTGGTGCTTT AGGGTTTGGT 
GCTAATCATT TTCTTACGGG CTCGGCTCAC GACATGAGTG CGATGGGTGG CGAATCTGCT
GCAAGCTCTA ACGATCCGCT TTACTGGGTT GCCCCAATGG ATCCGAACTA CAAACGCGAC
AAGCCGGGCA AATCCCCAAT GGGCATGGAT TTAATTCCGG TTTACGCGGA AGATCTATCT
GGTGAGAAAA GTGCACCGGG TACTATCACT ATCGACCCTT CCGTTGAAAA CAACCTGGGT
GTAAAGACAG CAAAAGTCAC CTTGGAAAAA CTGTCCCCAC GTATCGAGAC CGTTGGTTAT
ATTGCCTTTG ATGAAAGCCA TCTATGGCAA ACAAACGTTC GTGTTGCGGG TTGGGTAGAG
AAACTTTACA TCAATGCTGT GGGTGAGAAG GTGAAGAAAG GCGATGTTCT TTTCACTCTC
TACTCTCCAG AACTGGTTAA AGCACAAGAA GAGTTGCTGA ATGCTTACCG TACAGGCCGC
CAAGGTCTAG TGAAAGGCGC AACTGAGCGT TTAGTGACGC TTGGTGTAGA CCGTGCTCAA
ATCAAATCCA TTACTCGTAG TGGTAAAGCA TCGCAAACCA TTGAAATCAA AGCACCGGCT
GACGGTGTCA TTGCAAGCTT AAACGTGCGT GAAGGTGGCT ATTTGTCCCC TGCTCAAGCG
GTGATCAGTG CAGGTCCGTT GGACAATGTT TGGGTTGATG CAGAAGTCTT TGAGCGTCAA
GCACACTGGA TGAAAGCGGG TTCTCAAGCC ACGATGACCC TTGACGCGAT TCCGGGCAAT
GAATGGCAAG GTGTTGTCGA TTACGTGTAC CCAATCCTTG ATCCAACAAC ACGTACATTA
CGTGTACGCC TTAAATTTCC TAACCCAAAT GGCGAATTAA AACCAAACAT GTTCGCTAAT
ATTGCCCTTC AGCCTGTCAC TGACGACGCA GTATTAACGA TTCCTAAATC ATCTGTTATC
CGCTCTGGTG GTATGACTCG CGTTGTTCTG GCTGAAGGTA ACGGCAAATA CCGCTCAGCT
CGAATTGAAG TCGGTCGTGA AGCCGGAGAG CAAATCGAGG TATTACAAGG TTTGAAGCAA
GATGACAAGA TAGTCACCTC TGCGCACTTC ATGCTCGATT CTGAATCTAG CCAATCTGCA
GATCTATCTC GTATTAACGG TGTCGAACCA GAAGCAGAAA CGGCATGGGC AAAAGGTGAA
ATCACCGATG TAATGAAAGA TCACCGCATG CTGACCATCA ACCACCAGCC GGTACCAGAG
TGGGATTGGC CTGGCATGGC GATGAACTTC ACTTTCGCTG ATGGCGTTGA TATGGGTGAC
TTGAAAAAAG GCCAAGCCAT TGAATTTGAA ATGCAAAAGA CAGAATCTGG CCAGTACCAA
ATCATCGACT TCCATTCATC AAAAAGCACT ACTGACAAAA GCATCATTTC GGCAGAAGTT
TGGCTAACTG GTGACATCAC AATGCTGATG GCCGACTTTG GCATGATCAC CTTAAACCAC
TTACCGGTTG CAGAATGGAA CTGGGACGCA GGCGAGATGA ACTTCTCTGT GGGTGAAGAC
GTTGATCTAA CGGGTTTTGA AGAAGGACAG AAAGTTCGGT TTCTAGTTGA AAAACAAGGG
GCTGACTATG TTCTTAAACA GCTAATTCCT GCAACAACAG CCGTCGAGGG TTAA
 
Protein sequence
MKTLQVATIA LIVGGALGFG ANHFLTGSAH DMSAMGGESA ASSNDPLYWV APMDPNYKRD 
KPGKSPMGMD LIPVYAEDLS GEKSAPGTIT IDPSVENNLG VKTAKVTLEK LSPRIETVGY
IAFDESHLWQ TNVRVAGWVE KLYINAVGEK VKKGDVLFTL YSPELVKAQE ELLNAYRTGR
QGLVKGATER LVTLGVDRAQ IKSITRSGKA SQTIEIKAPA DGVIASLNVR EGGYLSPAQA
VISAGPLDNV WVDAEVFERQ AHWMKAGSQA TMTLDAIPGN EWQGVVDYVY PILDPTTRTL
RVRLKFPNPN GELKPNMFAN IALQPVTDDA VLTIPKSSVI RSGGMTRVVL AEGNGKYRSA
RIEVGREAGE QIEVLQGLKQ DDKIVTSAHF MLDSESSQSA DLSRINGVEP EAETAWAKGE
ITDVMKDHRM LTINHQPVPE WDWPGMAMNF TFADGVDMGD LKKGQAIEFE MQKTESGQYQ
IIDFHSSKST TDKSIISAEV WLTGDITMLM ADFGMITLNH LPVAEWNWDA GEMNFSVGED
VDLTGFEEGQ KVRFLVEKQG ADYVLKQLIP ATTAVEG