| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06362 |
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| Symbol | |
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| ID | 5557593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 1530116 |
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| End bp | 1534354 |
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| Gene Length | 4239 bp |
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| Protein Length | 1412 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640910835 |
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| Product | oxidoreductase |
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| Protein accession | YP_001448480 |
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| Protein GI | 156977574 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAA TTGTCATCGA TGGAAAATAT AGAATTGTAG AAGAGGGGCT GACCCTTCTA
GAAGCAGCAA AAGTGTGTGG AGTTGAGATT CCATCACTGT GCGGAATGAA CAAAAGTAAT
GAAAAAGTAC CGTGTGACTT GTGTGTGGTT GAAGTTGAAA GCGGCGGTAC TAAGCGCGCG
TGTGAACTTG AAGTTTACCG TGGCCTTAAT GTGGTCACGC AATCAGAACA ACTAAGCGAA
CATCGCAAAA AAGCCTTAAA CCGCATCATG ACGGACCATT ACGCCGATTG TGAAGCGCCA
TGTAAAACCG CGTGTCCAGC AGGTGTAGAT ATACAATCGT ACCTTTATCA CATCGCACAG
AACGATCATC AAAAAGCGAT TGAAGTGATT AAGCGTACGC TTCCTATGCC GTTATCGATT
GGCCGCGTAT GCCCTGCATT TTGTGAGAGC GAATGTCGCC GTTCGTTAGT CGATGAGCCT
ATCGCAATTC GTCAGCTAAA ACGTCATGCT GCGGATGCGG ATTTGTCTGC GCATGAAGCC
TATGTGCCAG AAAAGAAACC AAGCAAAGGT TTGAACATTG CCGTCGTCGG CAGTGGTCCT
GGTGGTCTAA CGGCTGGTTA CTACTTATCG AATGAGGGCT ACGACGTTAC GGTCTTTGAA
TCCATGCCCA AAGCGGGTGG TTGGTTACGT TATGGCATTC CTGAATACCG CTTGCCAAAG
GACATTCTCG ATAAAGAAAT CGAACTGATG TGCCGCAATG GTATGCAAGT TCACACCAAT
CAAAAGCTGG GTGCGGATTT CACGCTTTCT CAATTGAGTG AAGAATACGA CGCGGTGTGT
TTGGCGGTCG GTGCGTCTCA AGCGGTTGAA ATGCATTACA CAGGCAGCGA CCTTGAAGGA
TGTTACCTGG GCGTTGATTA CCTGAAAGAT TACGTGACTG AGCAAAACTA CGTCACGGGT
CAGAAAGTCG CGGTGATCGG TGGTGGTAAC ACAGCAATTG ACTGTGCTCG TACTGCGCGT
CGCGCTGGTG CAGACACCAC GTTGATTTAC CGTCGTACAC GTGACGAAAT GCCGGCAGAA
GACTATGAGA TTGTCGAAGC GGAACACGAA GGGGTGAAAT TCCACTTCTT GACCAACCCT
GCAGAAAACC TTGCCGATGA AACCGGACGC GTGAATGCGA TTCGTCTAGA GCGCATGGCG
TTGGGTGAGC CGGATGCATC TGGTCGTCGA AGCCCTAAAC CAACCGGCGA GTTCTTCACC
GAAGAGTTCG ACACCGTGAT TGCGGCAGTA TCGCAAAAGC CAGATCTGAG CTTCCTAGAG
GGCGAAGATT TGTCGATTCC GCTTACGCGT TGGAACACCT CTGATGCAGA TGAAAAGACC
ATGCACACCG GCACGGGCAA TATCTTCAGT ATTGGTGATT TCCGCCGTGG TCCAGCAACG
GCAGTTGAAG CTGTGGGTGA TGGCCGCGTT GCGGCAAAAG CCATTGATCT GTTTTTGAAT
GGTGATATGG CGGATATGCC AAAGGCAGCG TTCAACTCGC GTAAAGAGAA GAAGCTCTCT
CAAGTCGATC CGCTTCACTT CGAGAACATC CAGAAAGTCG CTCGATCTAT CATGCCTGAG
CTGACTCCAG CACAACGTGA GCAAAGCTTC GCTGAAGTGG AGTTGGGCTT TGATAACGAA
GAAGCGATGA AGGAAGCGGC GCGCTGCCTT GAATGTGGCT GTCAGGCCAA TACCGATTGT
GCGCTGCGTG ACTACTCCAC CGAATATGAA GCCGAGCAGA GCTTTGACTT CTCCTTGCAG
ATTAAATCAC ACCAAGATTG GTTAGATCTT CGTGCGAAAG ACCTGCGTCA TAAGTACGAA
GTTGACCGCA GCTCTGAGTT TATTGAGTTT GATGCTAACC GCTGTATTAG CTGTGGTCAG
TGCATCCAAG CGTGCCGCGA CAAAGCCGTA CACGGTGTAC TGAACTTCGT GTGCGATAAA
CAAGGTCGTC CGGCATTACG TCCTGACGAT CGTCCACACT TTGGAAGTAA CAAAAATGGC
TTAACCCTAA TGGGTGATTC GAACTGCGTG CAATGTGGCG CGTGCGTTCA AGTGTGTCCA
ACGGGCGCAA TGGTCGATAG TCGTGACCGT TCGCAAGGCC GTACTGAAGA TCTGAAAGCG
GTCGACACCA TTTGTACATA CTGTGGTGTG GGCTGTAAGT TGACCATGTT CGTGGACGAA
GCAACCAATA CGACTCGTTA CGTGAAAGGC GGTGACTCGC CGGTTAACCA AGGTATGCTA
TGTGTGAAAG GGCGCTTTGG TTTTGATTTC ATTGGCAGTG AAGAGCGTCT TACCACGCCA
TTGATTCGTA AAGACGGTTG GTTGCAGCCT GCAAGTTGGG AAGAGGCGAT TCAACTGATT
GCGAGCAAGT TCTCTGGCAT CAAGCAAGAT TTTGGCAGCA ACGCATTGGC GGGTTTCTCT
TCAGCGAAAA CCACCAATGA AGATAACTAC GCATTTCAAA AATTTGTCCG TCGTGAACTG
GGCACCAATA ACGTCGATCA CTGTGCGCGC TTGTGTCACG CATCGAGTGT GACGGGTCTT
GAGGCGTCAC TCGGTAGTGG TGCAATGACC AACGACATTC CAAGTATTAA GCACTCGGAT
GTGATCTTTA TTATCGGTTC GGATACTACA TCGGCACACC CGATCATCGC TTCACACATC
AAACAAGCAA TTCGTCACCA TGGCGCACGT TTGATTGTGG CTGACCCGAA ACGTGTCGAT
ATGGCAGAAC ATGCCGAGCT ATACATGGCG CACCGTCCGG GTACGGATGT GATGCTCCTA
AACGGAGTCA TGCAGCAGAT CATCAAGAAC GGCTGGTACG ATCAAGAGTA CATCGAAGAA
CGTGTCGACG GCTTTGATAC CTTACTGCAA GAAGTGATGT CGCCAGCTTA CAACCTCGAT
AAAGTGGAGT TGGTTACGGG CGTAAAAGCC GAAGACATTC AAGCAATGGC ACGTATGATT
GGCACGGCAG ATCGTACCGC TGTTTACTAC TCAATGGGTA TCACTCAGCA TACGACAGGT
CATGACAACG TGCGTTCTAT CGCTAACCTG CAATTGCTGT GTGGCAACAT CGGTATTGAA
GGTGGTGGTA TCAACCCGCT GCGTGGTCAA TCAAACGTGC AAGGCGCGTG TGATATGGGC
GCTTTGCCAA ACAGCTTCCC AGGCTACCAA AAGGTATACA ACCCAATTGT GCGTCAGAAG
TTTGCGATTG AATGGAACGC GCCAAATCTG CCTTCTGAGC AAGGTCTAAC CCTGACAGAA
ATCATTGATG CGGCTTGCCA TCGTGACGTT CGCGGTATGT ACATCATGGG TGAGAACCCA
GTATTGAGTG ACCCGAACCA AGCGCACGTG ATTGAGGGCT TAGAAGCGCT CGATTTCTTA
GTGGTTCAAG ACATCTTCCT AACAGAAACT GCGCAATACG CGGACGTGGT TCTGCCTTCT
TGCTCATTTG CAGAGAAAGC GGGGCACTTT ACCAATACGG AGCGACGTGT TCAGCGTGTG
AATCCGGTTG TCACGGCGCC GGGTGAAGCG AAAGAAGATT GGTGGATTAT TCAAGAAATC
GCTAATGCCA TGGGCAGTGA TTGGGATTAC CACTGCGTGT CTGATATCAC CAATGAAATC
GCACGTGTGA CACCTCAATA CGCGGGTCTT CGTTGGGATG CCATTACGCC AAACGGTGTG
CAATGGCCGA GCAACAAGAA CAACCCGGCA GGTACTCGCA TCATGCACCA AACCCAGTTT
ACTCGTGGTA AAGGGCAAAT GGTGGGCGTA CCGTTCCGTT ATGCGGCTGA GCTGCCAGAT
GAGGAGTTCC CACTTGTGTT GACGACGGGT CGTGTACTTG AGCAGTTCCA CACTGGCACC
ATGACGCGCA AAACCAAAGG GTTGGATAAC CTTGCTGGCC CTCGCGCGAT GGTGAGCGTG
GAAGACGCAG AAGCGCTAGG CATCAGTAAT GGTCAGCGTC TGACGGTGTC TACACGTCGC
GGTAGCATTG AGATTGATGC CTTTGTGACT AAGCGCATTC AAAAAGGTGT GGTGTTCATT
CCATTCCACT TTGTTGAATC GCCAGTCAAC CGCCTAACGA CAACGGCTAC TGATCCGCAT
GCGAAGATCC CTGAGTTCAA GGTTGCTGCG GTTAAAGTGG AAGTGAGCGA AAAAGCGCGA
AATGCAGAGC CTGCAACGGA AGCGGTTCAT CCCATTTAA
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| Protein sequence | MIEIVIDGKY RIVEEGLTLL EAAKVCGVEI PSLCGMNKSN EKVPCDLCVV EVESGGTKRA
CELEVYRGLN VVTQSEQLSE HRKKALNRIM TDHYADCEAP CKTACPAGVD IQSYLYHIAQ
NDHQKAIEVI KRTLPMPLSI GRVCPAFCES ECRRSLVDEP IAIRQLKRHA ADADLSAHEA
YVPEKKPSKG LNIAVVGSGP GGLTAGYYLS NEGYDVTVFE SMPKAGGWLR YGIPEYRLPK
DILDKEIELM CRNGMQVHTN QKLGADFTLS QLSEEYDAVC LAVGASQAVE MHYTGSDLEG
CYLGVDYLKD YVTEQNYVTG QKVAVIGGGN TAIDCARTAR RAGADTTLIY RRTRDEMPAE
DYEIVEAEHE GVKFHFLTNP AENLADETGR VNAIRLERMA LGEPDASGRR SPKPTGEFFT
EEFDTVIAAV SQKPDLSFLE GEDLSIPLTR WNTSDADEKT MHTGTGNIFS IGDFRRGPAT
AVEAVGDGRV AAKAIDLFLN GDMADMPKAA FNSRKEKKLS QVDPLHFENI QKVARSIMPE
LTPAQREQSF AEVELGFDNE EAMKEAARCL ECGCQANTDC ALRDYSTEYE AEQSFDFSLQ
IKSHQDWLDL RAKDLRHKYE VDRSSEFIEF DANRCISCGQ CIQACRDKAV HGVLNFVCDK
QGRPALRPDD RPHFGSNKNG LTLMGDSNCV QCGACVQVCP TGAMVDSRDR SQGRTEDLKA
VDTICTYCGV GCKLTMFVDE ATNTTRYVKG GDSPVNQGML CVKGRFGFDF IGSEERLTTP
LIRKDGWLQP ASWEEAIQLI ASKFSGIKQD FGSNALAGFS SAKTTNEDNY AFQKFVRREL
GTNNVDHCAR LCHASSVTGL EASLGSGAMT NDIPSIKHSD VIFIIGSDTT SAHPIIASHI
KQAIRHHGAR LIVADPKRVD MAEHAELYMA HRPGTDVMLL NGVMQQIIKN GWYDQEYIEE
RVDGFDTLLQ EVMSPAYNLD KVELVTGVKA EDIQAMARMI GTADRTAVYY SMGITQHTTG
HDNVRSIANL QLLCGNIGIE GGGINPLRGQ SNVQGACDMG ALPNSFPGYQ KVYNPIVRQK
FAIEWNAPNL PSEQGLTLTE IIDAACHRDV RGMYIMGENP VLSDPNQAHV IEGLEALDFL
VVQDIFLTET AQYADVVLPS CSFAEKAGHF TNTERRVQRV NPVVTAPGEA KEDWWIIQEI
ANAMGSDWDY HCVSDITNEI ARVTPQYAGL RWDAITPNGV QWPSNKNNPA GTRIMHQTQF
TRGKGQMVGV PFRYAAELPD EEFPLVLTTG RVLEQFHTGT MTRKTKGLDN LAGPRAMVSV
EDAEALGISN GQRLTVSTRR GSIEIDAFVT KRIQKGVVFI PFHFVESPVN RLTTTATDPH
AKIPEFKVAA VKVEVSEKAR NAEPATEAVH PI
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