Gene VIBHAR_06358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06358 
Symbol 
ID5557901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1526432 
End bp1527358 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content50% 
IMG OID640910831 
ProductABC transporter component 
Protein accessionYP_001448476 
Protein GI156977570 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT ACGCGATTCA AGCTGAAAAT GTAGTGAAAA AGTTTGGTGA CTTCACCGCC 
ATCAACAACA TCACGCTTAA TGTGCCCAAA GGCAGTATTT ATGGTTTTCT TGGCCCCAAC
GGCTGCGGTA AATCGACAAC CATTCGTGTG TTAACAGGCC TACTCAGCCC AAGCGAGGGC
AATGTTGATG TACTCGGGCT AGAGATCCCA AAACAATCGG AATTGCTGCG CCTTAAGATT
GGCTACATGA CACAAAAGTT CTCCCTCTAT GATGACCTGA CGGTTCAAGA GAATCTTGAG
TTTATTGGAC AAATCTTTGG TATGGAAACC AAGGCCCTAA AAGCTCGCAT CGAAGAACAA
CTAGCCACCT ACGGTCTCGA CCAACTACGC AAACAGCGAG TAGGCGGTAT GAGTGGCGGG
CAGAAACAAC GCTTGTCTCT CGCCGCAGCC ACCATGCACA AACCAGAACT GTTGTTTCTC
GATGAGCCCA CATCTGCGGT TGACCCAGAG AACCGACGCG ATTTCTGGGA GCAGTTGTTT
GATCTCTCTG ACCAAGGCAC GACGATTTTG GTCACAACGC ACTACATGGA TGAAGCAGAG
CGCTGTCATC GTCTGGCTAT TATGGAAGCG GGCGAAATTC GCGCCGATGG TGAGCCAGAA
GAACTCATGG CGCAAATGGG CGTTAACATC GTCGAAGTCA AAGCGGATAA CTTACGCGAG
CTAAAAGAGA AAGTCATTCA GCGCAAAGAG GTACGCTCAG CCGCACAGCT CGGCATTCGC
TTACGCATTT TAATCCACCA GCACATCGAA CAACCGATCG AATGGTTAAC CCAAACCTTT
CCTGAGCTTG AGGGCTGCGA GATGAACATT GCTCGTCCGA GCTTGGAAGA TGTGTTTGTC
AGCGTTACGG GGGAAGGTCG CCAATGA
 
Protein sequence
MTEYAIQAEN VVKKFGDFTA INNITLNVPK GSIYGFLGPN GCGKSTTIRV LTGLLSPSEG 
NVDVLGLEIP KQSELLRLKI GYMTQKFSLY DDLTVQENLE FIGQIFGMET KALKARIEEQ
LATYGLDQLR KQRVGGMSGG QKQRLSLAAA TMHKPELLFL DEPTSAVDPE NRRDFWEQLF
DLSDQGTTIL VTTHYMDEAE RCHRLAIMEA GEIRADGEPE ELMAQMGVNI VEVKADNLRE
LKEKVIQRKE VRSAAQLGIR LRILIHQHIE QPIEWLTQTF PELEGCEMNI ARPSLEDVFV
SVTGEGRQ