Gene VIBHAR_06357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06357 
Symbol 
ID5557900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1525477 
End bp1526427 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content50% 
IMG OID640910830 
Producthypothetical protein 
Protein accessionYP_001448475 
Protein GI156977569 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGC GAATCATTCT TGGCACCTTA GCCCTGACTC TTTTAACTGC CTGTTCCAAA 
GATGACGGAC AGCAAGCCCT TGGCACACTA GAGCGTGACC GCGTAACCTT CACTGCAACC
TCTAGCGAGA TAATTCGAGC CCTACCCATC AAGGAAGGCA GCCAAGTCAC CGAAGGAGAA
GTGTTGGTTC AGCTCGATAC AAAGAACCAA GAAGCTGTTT TAGCTCACGC CTTAGCCGAA
CAAGCAAAGG CTGACGCTTA TCTTTTGAAA TTGACCAATG GTGAGCGACC AGAAGACATT
GCCGCAGCGC AAGCACGTGT TGCCAGAGCG GAAGCTCAAT TGGTTGAAGC ACAAAAGAAC
TACCAACGTA AAGCGGAATT AGTTCGTAAA AAGCTCATCA GCCAATCAGA AAAAGACACC
GCTTTAGCAG CCCGAGATTC TGCCCGTGCA GAGCTAGACT CCTCACAAGA AGAGTTCAGC
AAACTGACCG CTGGCTCTCG CCCTGAAGAT ATTGAACAAG CGAAAGCCGC ACTCATGGTA
GCAAAAGCTG ATGTAGCATT GCAAGACCAG AAACTGGCAG AACTCACCAT CACCGCCACG
CGAGATGGCT TGTTAGATAA CCTACCGTTT AACCTTGGCG AACGCGTCCC TATCAATAGC
GTGGTTGCTG TAATACAAGC TAGCCGCGTC CCATACGCTC GTGTTTATGT TCCTGCTAAC
TATCGAGTCG ACTTTGTGCC GGGTAAAACG GTTAACGTGC ATGTAGATGG TGTTGAGCAA
CCATATAGCG GCACCGTTCG TTGGGTAGCG ACTGAGCCTT CATTCACACC TTATTTCGCG
CTCACCGAGG AAGAACGCTC GCGTTTGATG TACCTAGCAG AAGTCGACCT ACAAGACTCC
GCACAATCCT TGCCTTCAGG TATCCCAGCG CAAGTGGATT TGGTGGAGTA A
 
Protein sequence
MMKRIILGTL ALTLLTACSK DDGQQALGTL ERDRVTFTAT SSEIIRALPI KEGSQVTEGE 
VLVQLDTKNQ EAVLAHALAE QAKADAYLLK LTNGERPEDI AAAQARVARA EAQLVEAQKN
YQRKAELVRK KLISQSEKDT ALAARDSARA ELDSSQEEFS KLTAGSRPED IEQAKAALMV
AKADVALQDQ KLAELTITAT RDGLLDNLPF NLGERVPINS VVAVIQASRV PYARVYVPAN
YRVDFVPGKT VNVHVDGVEQ PYSGTVRWVA TEPSFTPYFA LTEEERSRLM YLAEVDLQDS
AQSLPSGIPA QVDLVE