Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06355 |
Symbol | |
ID | 5557898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1523375 |
End bp | 1524154 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640910828 |
Product | D-serine deaminase |
Protein accession | YP_001448473 |
Protein GI | 156977567 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTCTTA ATGTACTGAT TGAGTTTGGA GTCGAAGGCG GTCGCTGTGG ATGCCGAAAC CAACAAGATG TGGTTGAGCT AGCCACACTC ATCCACCAGC AACCTCACCT TACGCTCAAA GGTATCGAGG TCTACGAAGG TATCATTCAT GGTGACAATG CTGAGCGGGA CATCCGTGAC TTCCTCAACA CCACATTAGA AATCGCAGCT CAACTACAAA ACGACAAGTT GATTGAGTCT AAACCTCTTG TTACTGGCGC AGGCTCTGCT TGGTATGACG TAGTTTCTGA ATGCTTTGCC AACCTAGAAG ATTTTGACGC CATCATTCGC CCAGGTTGCT ACGCAATTCA TGACACAGGC ATTTACCTAG ACGCACAAAA CAAAGTCATG CAGCGCGCTG AAAACAACCA AGGTGCCGCG TGTGACTTAG GTGGTGATCT GGAATCAGCA CTAGAGCTTT GGGCTTATGT GATTTCTCGC CCTGAGCCAA CCAAGCTAGT TGCCGGCTTC GGTAAACGTG ACGTGGCGTT TGATGCTGGA TTGCCAATCC CTGAGCGCGC ATACCGCGAT GGTGAGTCAA TCTCTATTGA AAGTGCGGTA ACGACCGCGG TAATGGATCA GCATGCGTTC ATCGAAGTAG GCGCAAACAG CGACCTTCAA GTGGGTGATA TGATTGCCTT CTCAACCTCT CATCCATGTT TAACGTTTGA TAAGTGGCGT GCAGTGGCAG TTTGTGATGA TGAGTATCAA GTCACTCATT GGGTGAAAAC CCGTTTCTGA
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Protein sequence | MPLNVLIEFG VEGGRCGCRN QQDVVELATL IHQQPHLTLK GIEVYEGIIH GDNAERDIRD FLNTTLEIAA QLQNDKLIES KPLVTGAGSA WYDVVSECFA NLEDFDAIIR PGCYAIHDTG IYLDAQNKVM QRAENNQGAA CDLGGDLESA LELWAYVISR PEPTKLVAGF GKRDVAFDAG LPIPERAYRD GESISIESAV TTAVMDQHAF IEVGANSDLQ VGDMIAFSTS HPCLTFDKWR AVAVCDDEYQ VTHWVKTRF
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