Gene VIBHAR_06355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06355 
Symbol 
ID5557898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1523375 
End bp1524154 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content49% 
IMG OID640910828 
ProductD-serine deaminase 
Protein accessionYP_001448473 
Protein GI156977567 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTCTTA ATGTACTGAT TGAGTTTGGA GTCGAAGGCG GTCGCTGTGG ATGCCGAAAC 
CAACAAGATG TGGTTGAGCT AGCCACACTC ATCCACCAGC AACCTCACCT TACGCTCAAA
GGTATCGAGG TCTACGAAGG TATCATTCAT GGTGACAATG CTGAGCGGGA CATCCGTGAC
TTCCTCAACA CCACATTAGA AATCGCAGCT CAACTACAAA ACGACAAGTT GATTGAGTCT
AAACCTCTTG TTACTGGCGC AGGCTCTGCT TGGTATGACG TAGTTTCTGA ATGCTTTGCC
AACCTAGAAG ATTTTGACGC CATCATTCGC CCAGGTTGCT ACGCAATTCA TGACACAGGC
ATTTACCTAG ACGCACAAAA CAAAGTCATG CAGCGCGCTG AAAACAACCA AGGTGCCGCG
TGTGACTTAG GTGGTGATCT GGAATCAGCA CTAGAGCTTT GGGCTTATGT GATTTCTCGC
CCTGAGCCAA CCAAGCTAGT TGCCGGCTTC GGTAAACGTG ACGTGGCGTT TGATGCTGGA
TTGCCAATCC CTGAGCGCGC ATACCGCGAT GGTGAGTCAA TCTCTATTGA AAGTGCGGTA
ACGACCGCGG TAATGGATCA GCATGCGTTC ATCGAAGTAG GCGCAAACAG CGACCTTCAA
GTGGGTGATA TGATTGCCTT CTCAACCTCT CATCCATGTT TAACGTTTGA TAAGTGGCGT
GCAGTGGCAG TTTGTGATGA TGAGTATCAA GTCACTCATT GGGTGAAAAC CCGTTTCTGA
 
Protein sequence
MPLNVLIEFG VEGGRCGCRN QQDVVELATL IHQQPHLTLK GIEVYEGIIH GDNAERDIRD 
FLNTTLEIAA QLQNDKLIES KPLVTGAGSA WYDVVSECFA NLEDFDAIIR PGCYAIHDTG
IYLDAQNKVM QRAENNQGAA CDLGGDLESA LELWAYVISR PEPTKLVAGF GKRDVAFDAG
LPIPERAYRD GESISIESAV TTAVMDQHAF IEVGANSDLQ VGDMIAFSTS HPCLTFDKWR
AVAVCDDEYQ VTHWVKTRF