Gene VIBHAR_06348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06348 
Symbol 
ID5557947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1516554 
End bp1516889 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content51% 
IMG OID640910821 
Product2-keto-3-deoxy-6-phosphogluconatealdolase 
Protein accessionYP_001448466 
Protein GI156977560 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAAG CAATGATTCA GCAACTTCAG CAATTTAAAG TTATTCCTGT TATCCAAATC 
AATAAGGTTG AGCACGCGAT CCCACTGGCG AAAGTGTTAG TAGAAAACGG TCTGCCAGTT
GCGGAAGTGA CGTTTCGAAC AGAAGCCGCT GCCGATGCGA TTAAAGCCAT GCGCGATGCT
TACCCGCAAA TGTGCATCGG TGCTGGTACG GTACTGACGC CAGAGCAGAT TACCCAAGCA
AAAGACGCGG GTGCAGAGTT TATTGTCGCG CCGGGGTTGA ACCCTGAGGG ATCCCCACAT
CTTTTCACCG GAACTCTGCC GCACTTATCG CTTTGA
 
Protein sequence
MSQAMIQQLQ QFKVIPVIQI NKVEHAIPLA KVLVENGLPV AEVTFRTEAA ADAIKAMRDA 
YPQMCIGAGT VLTPEQITQA KDAGAEFIVA PGLNPEGSPH LFTGTLPHLS L