Gene VIBHAR_06344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06344 
Symbol 
ID5558702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1510958 
End bp1512004 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content46% 
IMG OID640910817 
Product6-phosphogluconolactonase 
Protein accessionYP_001448462 
Protein GI156977556 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTAA ATGGTCACTT ACATTTTTAT GTAGGCACCT ATACCGATTC ACCAAGCCAA 
AGTCAGGGCA TTGCGTGTGT TTCTCTCGAT ACTGCTACTG GCGCATTAAC GCTCATTAAT 
GAACTTGTTC CAGACGCAGT AAAAACGATT CGTAACCCTT CTTACCTTGC GCTCAAAGGA 
GAGGGTTTAT ATACCTTTAA TGAAGTCGAT CGCGTGGCAG GTGCAGAGCT GATATTTGCT 
GAAAAAACAG ACAGCTATGG ATTGCCAATT GAAGGTGACT ACCCTTGCCA TATCGACATT 
AAAGAAGAGT TACTCGCTGT TGCAAACTAC GGTTCCGGCA ATGTAAGTGT TTACCAACTT 
GATGAACAAG GTAAGCCGTT GAAATCCATT GCAGAATTGT ATGTAGAAGG CAATGGGCCG 
AATATTGACC GTCAGACTTC ACCTCATGCC CACCAAGTCA CTTTTCTAAA ACACTCCGCT 
CAATTGGCTG TGGTCGATTT AGGTACAGAC CGTGTTCATT TCTATGACTA CGGCAATGAT 
GGTGAGACAG TTAACTTTCC ACTTTCTCAA AGTGTCGCTA TGCCTGCTGG CTCAGGGCCT 
CGTCATTTGA TCTTCAATCG TGATGAATCT GTTGCGTACG TTGTTTGCGA ATTGTCTGAA 
ACTCTGGTGG TACTTCGCAA GCAAAACGGA CAATGGAATC TGACTCAGCA AGTTAAACTG 
CTAGCCGATG AAGAGAACAA AGAAGCGGCG TCTGCGATTC GTCTCTCTGC GGATGAGCGC 
TTTGTCTATG TCTCATGCCG CGCGCAAAAT CTGATCAGTA CATTTGATGT AACGAGTAAT 
ACTCCGGTTC AAATTGCGGC GTCCGATTGT GGTGGCGCGT TCCCAAGAGA TTTTGTTTTA 
TCCCGTGACG GGCAGTGGAT GCTCGTTGCT AATCAACATT CAGATAATGT CGCTAGCTTC 
CATAGGAATC CGGAAACTGG CGTTATCACT CCAACCGGAT ATTCGTGCGA CATCGGTGCG 
CCTGTGTGTT TGGTTGAGAA GCCGTAA
 
Protein sequence
MIVNGHLHFY VGTYTDSPSQ SQGIACVSLD TATGALTLIN ELVPDAVKTI RNPSYLALKG 
EGLYTFNEVD RVAGAELIFA EKTDSYGLPI EGDYPCHIDI KEELLAVANY GSGNVSVYQL 
DEQGKPLKSI AELYVEGNGP NIDRQTSPHA HQVTFLKHSA QLAVVDLGTD RVHFYDYGND 
GETVNFPLSQ SVAMPAGSGP RHLIFNRDES VAYVVCELSE TLVVLRKQNG QWNLTQQVKL 
LADEENKEAA SAIRLSADER FVYVSCRAQN LISTFDVTSN TPVQIAASDC GGAFPRDFVL 
SRDGQWMLVA NQHSDNVASF HRNPETGVIT PTGYSCDIGA PVCLVEKP